RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TRAV1-1A0A0B4J248 108 aa8.34□□□□□ -1.08
MCF2-209ENST00000520602 DLL1O00548 723 aa8.34□□□□□ -1.08
MCF2-209ENST00000520602 GCHFRP30047 84 aa8.34□□□□□ -1.08
MCF2-209ENST00000520602 PLA2G5P39877 138 aa8.34□□□□□ -1.08
MCF2-209ENST00000520602 GATA4P43694 442 aa8.34□□□□□ -1.08
MCF2-209ENST00000520602 CNN1P51911 297 aaKnown RBP8.34□□□□□ -1.08
MCF2-209ENST00000520602 C9orf152Q5JTZ5 239 aa8.34□□□□□ -1.08
MCF2-209ENST00000520602 ANAPC16Q96DE5 110 aa8.34□□□□□ -1.08
MCF2-209ENST00000520602 SCGB1D1O95968 90 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 SLC25A5P05141 298 aaKnown RBP8.33□□□□□ -1.08
MCF2-209ENST00000520602 CD24P25063 80 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 TMEM30BQ3MIR4 351 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 ETFRF1Q6IPR1 90 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 CYP2G1PQ6ZSU1 146 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 MIR17HGQ75NE6 70 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 SSX7Q7RTT5 188 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 OR5AU1Q8NGC0 362 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 ZNF596Q8TC21 504 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 BTF3L4Q96K17 158 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 CLEC7AQ9BXN2 247 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 TEX50A0A1B0GTY4 177 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 CRYBB3P26998 211 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 CEACAM3P40198 252 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 GPR6P46095 362 aaPredicted RBP8.33□□□□□ -1.08
MCF2-209ENST00000520602 SLC35B1P78383 322 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 SSX2Q16385 188 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 GGTLC1Q9BX51 225 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 FBXL15Q9H469 300 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 TUBA4BQ9H853 241 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 PCSK5Q92824 1860 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 MGAQ8IWI9 3026 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 H3BTX0 84 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 MOSP00540 346 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 CXCL1P09341 107 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 CCKARP32238 428 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 UTF1Q5T230 341 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 MMD2Q8IY49 270 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 OR1L4Q8NGR5 311 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 LYPD6BQ8NI32 183 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 SGK494Q96LW2 274 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 GGACTQ9BVM4 153 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 TPPP3Q9BW30 176 aa8.33□□□□□ -1.08
MCF2-209ENST00000520602 A0A1B0GW64 132 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 SCO2A0A1W2PP80 73 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 CXorf65A6NEN9 183 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 COL8A2P25067 703 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 PPOXP50336 477 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 RPL23P62829 140 aaKnown RBP8.32□□□□□ -1.08
MCF2-209ENST00000520602 MGST2Q99735 147 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 GPR61Q9BZJ8 451 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 SCGB2A1O75556 95 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 TRGC1P0CF51 173 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 ELOBQ15370 118 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 SPATA31B1PQ5VZV4 182 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 SLC25A48Q6ZT89 311 aaKnown RBP8.32□□□□□ -1.08
MCF2-209ENST00000520602 OR52E5Q8NH55 327 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 SEPSECSQ9HD40 501 aaKnown RBP8.32□□□□□ -1.08
MCF2-209ENST00000520602 TNFRSF19Q9NS68 423 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 MSRB2Q9Y3D2 182 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 GRNP28799 593 aaKnown RBP8.32□□□□□ -1.08
MCF2-209ENST00000520602 PRCDQ00LT1 54 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 NHLRC2Q8NBF2 726 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 TMEM133Q9H2Q1 129 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 C11orf1Q9H5F2 150 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 DNAJC4Q9NNZ3 241 aa8.32□□□□□ -1.08
MCF2-209ENST00000520602 ZNF331Q9NQX6 463 aaPredicted RBP8.32□□□□□ -1.08
MCF2-209ENST00000520602 TNRC6BQ9UPQ9 1833 aaKnown RBP8.31□□□□□ -1.08
MCF2-209ENST00000520602 SEC14L6B5MCN3 397 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 LHBP01229 141 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 HTR1DP28221 377 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 CD81P60033 236 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 FAM90A2PQ658T7 463 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 PDPNQ86YL7 162 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 ODF3L1Q8IXM7 274 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
MCF2-209ENST00000520602 ZCCHC14Q8WYQ9 949 aaKnown RBP8.31□□□□□ -1.08
MCF2-209ENST00000520602 PAXXQ9BUH6 204 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 GNB4Q9HAV0 340 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 CREBBPQ92793 2442 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 FCN1O00602 326 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 LIPFP07098 398 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 THBDP07204 575 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 CDKN1AP38936 164 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 LGALS7P47929 136 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 EFNB3Q15768 340 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 HLA-DRB5Q30154 266 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 ZNF672Q499Z4 452 aaPredicted RBP8.31□□□□□ -1.08
MCF2-209ENST00000520602 ARSJQ5FYB0 599 aaPredicted RBP8.31□□□□□ -1.08
MCF2-209ENST00000520602 DERL1Q9BUN8 251 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 ZNF430Q9H8G1 570 aaPredicted RBP8.31□□□□□ -1.08
MCF2-209ENST00000520602 FAM90A9PA6NNJ1 464 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 PHOX2AO14813 284 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 WNT2P09544 360 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 C8orf88P0DMB2 117 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 AGAP20933 346 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 Q56UQ5 140 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 PQLC2Q6ZP29 291 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 TMEM144Q7Z5S9 345 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 LHFPL4Q7Z7J7 247 aa8.31□□□□□ -1.08
MCF2-209ENST00000520602 ELOVL1Q9BW60 279 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms