RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GGT3PA6NGU5 568 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 CRYZL1O95825 349 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 HMGN1P05114 100 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 FAM236CP0DP71 79 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 NFYAP23511 347 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 PEBP1P30086 187 aaKnown RBP2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 CAPZBP47756 277 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 EVX1P49640 407 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 RPS20P60866 119 aaKnown RBP2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 TMEM258P61165 79 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 DCANP1Q8TF63 244 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 DYDC1Q8WWB3 177 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 TOMM6Q96B49 74 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 BTF3L4Q96K17 158 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 KLF6Q99612 283 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 CGREF1Q99674 301 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 DERL1Q9BUN8 251 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 TMEM147Q9BVK8 224 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 C6orf62Q9GZU0 229 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 TAS2R7Q9NYW3 318 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 IDI2-AS1Q9NZ38 188 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 NOTCH2Q04721 2471 aa2.28□□□□□ -2.04
HMGB1P46-201ENST00000520062 CCDC144AA2RUR9 1427 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 PIK3C2GO75747 1445 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 NCOA3Q9Y6Q9 1424 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 ANKRD30AQ9BXX3 1397 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 EXOC1LA0A1B0GW35 172 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 hADV38S2A0JD32 116 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 E5RI56 91 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 SLC22A1O15245 554 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 IFNA14P01570 189 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 SERPINA7P05543 415 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 RAB4BP61018 213 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 ARF6P62330 175 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 RUNX1Q01196 453 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 AADACL3Q5VUY0 350 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 OOSP2Q86WS3 158 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 MCFD2Q8NI22 146 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 CT55Q8WUE5 264 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 LZICQ8WZA0 190 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 TIMM21Q9BVV7 248 aa2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 NMNAT1Q9HAN9 279 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 PAIP2BQ9ULR5 123 aaKnown RBP2.27□□□□□ -2.05
HMGB1P46-201ENST00000520062 ITGB4P16144 1822 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 DPRXA6NFQ7 191 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 ZNF705FA8MVS1 300 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 PIRO00625 290 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 PDE6DO43924 150 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 OR7C1O76099 320 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 IFNA10P01566 189 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 IGKV1-5P01602 117 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 S100A1P23297 94 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 SERPINB9P50453 376 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 FXYD2P54710 66 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 CCDC153Q494R4 210 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 TMEM42Q69YG0 159 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 KTN1-AS1Q86SY8 53 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 GDPD1Q8N9F7 314 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 RNASE11Q8TAA1 199 aaKnown RBP2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 RASSF5Q8WWW0 418 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 PYDC1Q8WXC3 89 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 SIGMAR1Q99720 223 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 C11orf68Q9H3H3 251 aaKnown RBP2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 PARVBQ9HBI1 364 aa2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 MRPL40Q9NQ50 206 aaKnown RBP2.26□□□□□ -2.05
HMGB1P46-201ENST00000520062 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 TRAV9-1A0A075B6T8 112 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 IGKV1D-43A0A0B4J1Z2 117 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 LOC105371267A0A1B0GV96 52 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 PGRMC1O00264 195 aaKnown RBP2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 SMIM24O75264 130 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 CIAO1O76071 339 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 CST2P09228 141 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 RBP1P09455 135 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 OR4E1P0C645 316 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 SMIM10L2AP0DMW4 78 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 SMIM10L2BP0DMW5 78 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 LIN52Q52LA3 116 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 SPANXN3Q5MJ09 141 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 OR51A2Q8NGJ7 313 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 C19orf12Q9NSK7 152 aa2.25□□□□□ -2.05
HMGB1P46-201ENST00000520062 ROBO3Q96MS0 1386 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 A0A0D9SEW6 157 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 TRBV10-2A0A0K0K1G8 114 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 OR51F1A6NGY5 319 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 HMSDA8MTL9 139 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 OR2B3O76000 313 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 NAPSAO96009 420 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 SERPINA1P01009 418 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 PPBPP02775 128 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 SERPINE1P05121 402 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 ZNF80P51504 273 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 DEFB103AP81534 67 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 C12orf74Q32Q52 190 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 TEX36Q5VZQ5 186 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 TMEM86AQ8N2M4 240 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 C12orf45Q8N5I9 185 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 OR52L1Q8NGH7 329 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms