RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 SOD3P08294 240 aa6.82□□□□□ -1.32
HMGB4-203ENST00000519684 ARL14EPLP0DKL9 152 aa6.82□□□□□ -1.32
HMGB4-203ENST00000519684 TMEM241Q24JQ0 296 aa6.82□□□□□ -1.32
HMGB4-203ENST00000519684 CST9LP1Q5W188 147 aa6.82□□□□□ -1.32
HMGB4-203ENST00000519684 ZFP82Q8N141 532 aa6.82□□□□□ -1.32
HMGB4-203ENST00000519684 TEX45Q8NA69 505 aa6.82□□□□□ -1.32
HMGB4-203ENST00000519684 CHODLQ9H9P2 273 aa6.82□□□□□ -1.32
HMGB4-203ENST00000519684 TLN1Q9Y490 2541 aaKnown RBP6.81□□□□□ -1.32
HMGB4-203ENST00000519684 MAP1BP46821 2468 aaKnown RBP6.81□□□□□ -1.32
HMGB4-203ENST00000519684 IGHV1-3A0A0C4DH29 117 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 F6UZH7 168 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 TSPAN9O75954 239 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 STAG3L2P0CL84 134 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 STAG3L3P0CL85 134 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 GPX4P36969 197 aaPredicted RBP6.81□□□□□ -1.32
HMGB4-203ENST00000519684 UBE2G2P60604 165 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 CD69Q07108 199 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 ADIRFQ15847 76 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 CYP2G1PQ6ZSU1 146 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 SLC16A13Q7RTY0 426 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 DTX2Q86UW9 622 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 MMD2Q8IY49 270 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 PNKDQ8N490 385 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 RNASEH2CQ8TDP1 164 aaKnown RBP6.81□□□□□ -1.32
HMGB4-203ENST00000519684 CACNG8Q8WXS5 425 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 C1orf159Q96HA4 380 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 PARLQ9H300 379 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 MAS1LP35410 378 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 DLX1P56177 255 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 PRR20EP86478 221 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 PRR20CP86479 221 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 PRR20DP86480 221 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 PRR20BP86481 221 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 PRR20AP86496 221 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 GAMTQ14353 236 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 SPNS3Q6ZMD2 512 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 LY6G5BQ8NDX9 201 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 C2CD4CQ8TF44 421 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 ABHD5Q8WTS1 349 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 FAM122AQ96E09 287 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 TXNDC17Q9BRA2 123 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 SSBP3Q9BWW4 388 aaPredicted RBP6.81□□□□□ -1.32
HMGB4-203ENST00000519684 CTDSP1Q9GZU7 261 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 UBTD1Q9HAC8 227 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 SLC45A2Q9UMX9 530 aa6.81□□□□□ -1.32
HMGB4-203ENST00000519684 IGF2RP11717 2491 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 POLEQ07864 2286 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 LOC105371242A0A075B767 164 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 TMEM8BA6NDV4 472 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 CLDN34H7C241 214 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 AGAP20933 346 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 GNLYP22749 145 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 OR10J1P30954 320 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 PRB3Q04118 309 aaPredicted RBP6.8□□□□□ -1.32
HMGB4-203ENST00000519684 HABP2Q14520 560 aaPredicted RBP6.8□□□□□ -1.32
HMGB4-203ENST00000519684 TNXAQ16473 311 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 C10orf55Q5SWW7 151 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 MALSU1Q96EH3 234 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 ACY3Q96HD9 319 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 TPSG1Q9NRR2 321 aa6.8□□□□□ -1.32
HMGB4-203ENST00000519684 C22orf46C9J442 243 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 M0R1W7 72 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 S100A6P06703 90 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 GCHFRP30047 84 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 CEACAM3P40198 252 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 GPR6P46095 362 aaPredicted RBP6.79□□□□□ -1.32
HMGB4-203ENST00000519684 RPL27AP46776 148 aaKnown RBP6.79□□□□□ -1.32
HMGB4-203ENST00000519684 WT1-ASQ06250 92 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 PSG5Q15238 335 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 PRSS8Q16651 343 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 FAM78BQ5VT40 261 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 OR4P4Q8NGL7 312 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 ITLN2Q8WWU7 325 aaPredicted RBP6.79□□□□□ -1.32
HMGB4-203ENST00000519684 YPEL4Q96NS1 127 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 C19orf24Q9BVV8 132 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 TMEM242Q9NWH2 141 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 METTL1Q9UBP6 276 aaKnown RBP6.79□□□□□ -1.32
HMGB4-203ENST00000519684 URGCP-MRPS24S4R325 110 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 PKDREJQ9NTG1 2253 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 E7EUB6 86 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 CLN5O75503 358 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 LINC00869P0C866 280 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 HTR1DP28221 377 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 RPS10P46783 165 aaKnown RBP6.79□□□□□ -1.32
HMGB4-203ENST00000519684 UQCRFS1P47985 274 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 ATP5G3P48201 142 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 ARF6P62330 175 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 GNB1P62873 340 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 PLGLAQ15195 96 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 ELOBQ15370 118 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 ETFRF1Q6IPR1 90 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 RITA1Q96K30 269 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 TECRQ9NZ01 308 aaKnown RBP6.79□□□□□ -1.32
HMGB4-203ENST00000519684 FUT9Q9Y231 359 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 NBEAQ8NFP9 2946 aa6.79□□□□□ -1.32
HMGB4-203ENST00000519684 A0A1W2PPI3 338 aa6.78□□□□□ -1.32
HMGB4-203ENST00000519684 CGB1A6NKQ9 187 aa6.78□□□□□ -1.32
HMGB4-203ENST00000519684 VENTXO95231 258 aa6.78□□□□□ -1.32
HMGB4-203ENST00000519684 TAS2R45P59539 299 aa6.78□□□□□ -1.32
HMGB4-203ENST00000519684 RPL23P62829 140 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms