RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 SPNS3Q6ZMD2 512 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 H2BFWTQ7Z2G1 175 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 MOB3BQ86TA1 216 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 ZCCHC24Q8N2G6 241 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 LINC00311Q8N616 119 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 RNASE11Q8TAA1 199 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 CD300LFQ8TDQ1 290 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 RAB1CQ92928 201 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 PINX1Q96BK5 328 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 FAM122AQ96E09 287 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 TVP23CQ96ET8 276 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 ELOVL1Q9BW60 279 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 MRPL20Q9BYC9 149 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 PARLQ9H300 379 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 SAP30LQ9HAJ7 183 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 PATZ1Q9HBE1 687 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 BIN3Q9NQY0 253 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 SIRT7Q9NRC8 400 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 GNG12Q9UBI6 72 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 MLXQ9UH92 298 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 VAX2Q9UIW0 290 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 LAMP3Q9UQV4 416 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 PRELID1Q9Y255 219 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 RBM7Q9Y580 266 aaKnown RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 LINC00312Q9Y6C7 94 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 ZFHX2Q9C0A1 2572 aaPredicted RBP3.63□□□□□ -1.83
PABPC1-212ENST00000519622 SVILO95425 2214 aa3.63□□□□□ -1.83
PABPC1-212ENST00000519622 PTPRQQ9UMZ3 2332 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 DMXL2Q8TDJ6 3036 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 TRBV24-1A0A075B6N3 115 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 IGKV1D-37A0A075B6S9 117 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 A0A087X0M5 115 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 TRAV38-1A0A0B4J264 116 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 A0A1B0GX30 115 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 CXorf65A6NEN9 183 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 CEBPZOSA8MTT3 80 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 C1orf196B1AJZ1 125 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 FNDC10F2Z333 226 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 H0YJW9 148 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 TMEM250H0YL14 139 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BKO60814 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 TNFRSF6BO95407 300 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 PLAUP00749 431 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 CA2P00918 260 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BJP06899 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 CRYGBP07316 175 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 OR4A8P0C604 315 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 STAG3L2P0CL84 134 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 STAG3L3P0CL85 134 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 SAA1P0DJI8 122 aaPredicted RBP3.62□□□□□ -1.83
PABPC1-212ENST00000519622 NQO2P16083 231 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BOP23527 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BBP33778 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 TAGLN2P37802 199 aaKnown RBP3.62□□□□□ -1.83
PABPC1-212ENST00000519622 OPRK1P41145 380 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 ATP5G3P48201 142 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 THBS3P49746 956 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 MEOX2P50222 304 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 EDDM3BP56851 147 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BDP58876 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 RAB11AP62491 216 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BCP62807 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 MRPS11P82912 194 aaKnown RBP3.62□□□□□ -1.83
PABPC1-212ENST00000519622 PRCDQ00LT1 54 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 MEF2BQ02080 365 aaPredicted RBP3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HNF4GQ14541 408 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 PRSS8Q16651 343 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST2H2BEQ16778 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 TMEM30BQ3MIR4 351 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 FBXL19-AS1Q494R0 122 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 TMEM155Q4W5P6 130 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 AKIRIN2Q53H80 203 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.62□□□□□ -1.83
PABPC1-212ENST00000519622 LDLRAD2Q5SZI1 272 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 NCMAPQ5T1S8 102 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 GFI1BQ5VTD9 330 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 MIC13Q5XKP0 118 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 ADAM5Q6NVV9 412 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 ZNF841Q6ZN19 808 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 SSX9Q7RTT3 188 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 C16orf82Q7Z2V1 217 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 TMEM144Q7Z5S9 345 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 ABHD12Q8N2K0 398 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 C8orf31Q8N9H6 132 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 OR10A7Q8NGE5 316 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 OR10G9Q8NGN4 311 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 OR10G7Q8NGN6 311 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 SCGB1C1Q8TD33 95 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 FRZBQ92765 325 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BHQ93079 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 LHX4Q969G2 390 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 C11orf52Q96A22 123 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 RITA1Q96K30 269 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 WFIKKN1Q96NZ8 548 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 CIB3Q96Q77 187 aaPredicted RBP3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BNQ99877 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 HIST1H2BMQ99879 126 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 NABP2Q9BQ15 211 aa3.62□□□□□ -1.83
PABPC1-212ENST00000519622 DERL1Q9BUN8 251 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms