RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 OR5D14Q8NGL3 314 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 GGHQ92820 318 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 FEVQ99581 238 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 FAAP24Q9BTP7 215 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 OR2D2Q9H210 308 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 RDH8Q9NYR8 311 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 GNG8Q9UK08 70 aa4.29□□□□□ -1.72
CTNNA1-216ENST00000519489 F6UB75 175 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 PDCD6O75340 191 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 HMGN1P05114 100 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 GLAP06280 429 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 RAB3AP20336 220 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 ZBTB25P24278 435 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 CRHBPP24387 322 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 P2RY1P47900 373 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 PPP5CP53041 499 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 EFNB1P98172 346 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 ASAH1Q13510 395 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 ZNF79Q15937 498 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 OR2B11Q5JQS5 317 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 DDI2Q5TDH0 399 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 SLC25A24Q6NUK1 477 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 SLC25A46Q96AG3 418 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 ATP6V0BQ99437 205 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 SELENOIQ9C0D9 397 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 DPH3P1Q9H4G8 78 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 TVP23BQ9NYZ1 205 aa4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 H2AFY2Q9P0M6 372 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-216ENST00000519489 TRAV9-2A0A087WT02 112 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 RGS16O15492 202 aaPredicted RBP4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 CRYGDP07320 174 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 RRASP10301 218 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 HLA-GP17693 338 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 TSPOP30536 169 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 RELQ04864 619 aaPredicted RBP4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 ARFRP1Q13795 201 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 GPR176Q14439 515 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 OR2G6Q5TZ20 316 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 AMTNQ6UX39 209 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 C6orf201Q7Z4U5 140 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 CMTM1Q8IZ96 169 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 GDPD1Q8N9F7 314 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 OR10G2Q8NGC3 310 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 RBPMSQ93062 196 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 Q96MT0 163 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 Q9HAA7 133 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 NOP10Q9NPE3 64 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 GID8Q9NWU2 228 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 CLEC2DQ9UHP7 191 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 COX11Q9Y6N1 276 aa4.27□□□□□ -1.73
CTNNA1-216ENST00000519489 BBIP1A8MTZ0 92 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 MFNGO00587 321 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 CREBL2O60519 120 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 FCGR3BO75015 233 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 EIF4EP06730 217 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 ZNF93P35789 620 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 PTTG1IPP53801 180 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 RPL8P62917 257 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 BLOC1S1P78537 153 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 HLA-DRB3P79483 266 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 MRPS15P82914 257 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 PSG9Q00887 426 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 KDM4DQ6B0I6 523 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 WDR93Q6P2C0 686 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 SETD6Q8TBK2 473 aa4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 SAV1Q9H4B6 383 aaPredicted RBP4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 RCL1Q9Y2P8 373 aaKnown RBP4.26□□□□□ -1.73
CTNNA1-216ENST00000519489 SAC3D1A6NKF1 404 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 B5MCH6 92 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 E9PI62 339 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 I3L2K1 104 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 SERPINE2P07093 398 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 OR2T7P0C7T2 308 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 OR13C7P0DN81 318 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 MGMTP16455 207 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 CRYBB3P26998 211 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 CBX3Q13185 183 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 UNC119Q13432 240 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 RBM48Q5RL73 367 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 IBA57Q5T440 356 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 FAM78BQ5VT40 261 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 WDR73Q6P4I2 378 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 GLIPR1L1Q6UWM5 242 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 HS3ST5Q8IZT8 346 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 MUL1Q969V5 352 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 IGF2BP2-AS1Q96M15 143 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 PDCD1LG2Q9BQ51 273 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 THYN1Q9P016 225 aa4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 F11RQ9Y624 299 aaKnown RBP4.25□□□□□ -1.73
CTNNA1-216ENST00000519489 TRBV6-6A0A0A6YYG2 114 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 A8MTW9 85 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 IBA57-AS1B1ANH7 110 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 ZNF780AO75290 641 aaPredicted RBP4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 GAGE7O76087 117 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 GAGE12FP0CL80 117 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 GAGE12GP0CL81 117 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 GAGE12IP0CL82 117 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 OSMP13725 252 aa4.24□□□□□ -1.73
CTNNA1-216ENST00000519489 CELP19835 753 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms