RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 GGCTO75223 188 aaKnown RBP10.09□□□□□ -0.79
VEGFA-219ENST00000518824 DHFRP00374 187 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 CLEC3BP05452 202 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 CD69Q07108 199 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 TRIM16LQ309B1 348 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 THOC7Q6I9Y2 204 aaKnown RBP10.09□□□□□ -0.79
VEGFA-219ENST00000518824 UNQ9165/PRO28630Q6UXU0 137 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 Q8N1Y9 231 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 CCDC71LQ8N9Z2 235 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 OR5B3Q8NH48 314 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 TSC22D3Q99576 134 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 NAA60Q9H7X0 242 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 MCUBQ9NWR8 336 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 SLC2A8Q9NY64 477 aa10.09□□□□□ -0.79
VEGFA-219ENST00000518824 ZMAT5Q9UDW3 170 aaKnown RBP10.09□□□□□ -0.79
VEGFA-219ENST00000518824 C14orf166Q9Y224 244 aaKnown RBP10.09□□□□□ -0.79
VEGFA-219ENST00000518824 TEX13DA0A0J9YY54 714 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-219ENST00000518824 CRYM-AS1A6NIL9 109 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 IGHV3-48P01763 117 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 AKR1C2P52895 323 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 HSPE1P61604 102 aaKnown RBP10.08□□□□□ -0.8
VEGFA-219ENST00000518824 PRCDQ00LT1 54 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 SELENOHQ8IZQ5 122 aaKnown RBP10.08□□□□□ -0.8
VEGFA-219ENST00000518824 OR2C3Q8N628 320 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 SCARB1Q8WTV0 552 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 TMEM222Q9H0R3 208 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 FKBP11Q9NYL4 201 aa10.08□□□□□ -0.8
VEGFA-219ENST00000518824 TRBV7-1A0A0A6YYK4 115 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 TMEM213A2RRL7 107 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 OR2T8A6NH00 312 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 CDS2O95674 445 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 S100A5P33763 92 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 ADMP35318 185 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 ETV6P41212 452 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 SUPT4H1P63272 117 aaKnown RBP10.07□□□□□ -0.8
VEGFA-219ENST00000518824 SURF2Q15527 256 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-219ENST00000518824 TATDN3Q17R31 274 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 TM4SF20Q53R12 229 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 GPHB5Q86YW7 130 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 Q8N402 240 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 GPR146Q96CH1 333 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 CXorf58Q96LI9 332 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 TMEM56Q96MV1 263 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 SDHCQ99643 169 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-219ENST00000518824 PRRT1Q99946 306 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 CHRDL1Q9BU40 450 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 SRRQ9GZT4 340 aa10.07□□□□□ -0.8
VEGFA-219ENST00000518824 IGHV3OR16-8A0A075B7F1 116 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 LGALS9O00182 355 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 FOLR2P14207 255 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 TMEM187Q14656 261 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 BAK1Q16611 211 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 CD300EQ496F6 205 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-219ENST00000518824 HSD17B13Q7Z5P4 300 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-219ENST00000518824 VN1R17PQ8TDU5 208 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 SIGLEC8Q9NYZ4 499 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 PEMTQ9UBM1 199 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 SMAD5-AS1Q9Y6J3 95 aa10.06□□□□□ -0.8
VEGFA-219ENST00000518824 ZNF320A2RRD8 509 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 ZNF785A8K8V0 405 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 I3L2K1 104 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 TGOLN2O43493 480 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 NXPH3O95157 252 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 AKR1C4P17516 323 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 DEFB114Q30KQ6 69 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 FAM209BQ5JX69 171 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 TMEM268Q5VZI3 342 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 PLET1Q6UQ28 207 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 SBSPONQ8IVN8 264 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 TOMM5Q8N4H5 51 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 OR1P1Q8NH06 330 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 RBPMSQ93062 196 aaKnown RBP10.05□□□□□ -0.8
VEGFA-219ENST00000518824 MISP3Q96FF7 219 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 PLEKHA3Q9HB20 300 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 C21orf62Q9NYP8 219 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 THYN1Q9P016 225 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 MLXQ9UH92 298 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 SCP2D1Q9UJQ7 156 aa10.05□□□□□ -0.8
VEGFA-219ENST00000518824 MT-CO2P00403 227 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 IFNA17P01571 189 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 FRMD6-AS1P0C7T7 363 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 RNASE2P10153 161 aaKnown RBP10.04□□□□□ -0.8
VEGFA-219ENST00000518824 CBLN1P23435 193 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 MLANAQ16655 118 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 SLC35G3Q8N808 338 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 UBAC2Q8NBM4 344 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 ZNF114Q8NC26 417 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
VEGFA-219ENST00000518824 PINX1Q96BK5 328 aaKnown RBP10.04□□□□□ -0.8
VEGFA-219ENST00000518824 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
VEGFA-219ENST00000518824 WDR89Q96FK6 387 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-219ENST00000518824 ZNF436Q9C0F3 470 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-219ENST00000518824 WFDC10AQ9H1F0 79 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 MRPL36Q9P0J6 103 aaKnown RBP10.04□□□□□ -0.8
VEGFA-219ENST00000518824 CACNG5Q9UF02 275 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 TMEM56-RWDD3S4R434 201 aa10.04□□□□□ -0.8
VEGFA-219ENST00000518824 A8MWP6 167 aa10.03□□□□□ -0.8
VEGFA-219ENST00000518824 ZNF207O43670 478 aaKnown RBP10.03□□□□□ -0.8
VEGFA-219ENST00000518824 CTSGP08311 255 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms