RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 HIPK2Q9H2X6 1198 aa9.28□□□□□ -0.92
VEGFA-218ENST00000518689 FKBP11Q9NYL4 201 aa9.28□□□□□ -0.92
VEGFA-218ENST00000518689 EXTL2Q9UBQ6 330 aa9.28□□□□□ -0.92
VEGFA-218ENST00000518689 CEPT1Q9Y6K0 416 aa9.28□□□□□ -0.92
VEGFA-218ENST00000518689 CYB5BO43169 146 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 PI3P19957 117 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 S100GP29377 79 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 RND3P61587 244 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 SPCS2Q15005 226 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 RNASE10Q5GAN6 216 aaKnown RBP9.27□□□□□ -0.93
VEGFA-218ENST00000518689 BTNL8Q6UX41 500 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 MARC2Q969Z3 335 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 MRGPRFQ96AM1 343 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 BSCL2Q96G97 398 aaPredicted RBP9.27□□□□□ -0.93
VEGFA-218ENST00000518689 TMEM56Q96MV1 263 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 ATP6V0BQ99437 205 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 TSC22D3Q99576 134 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 MRPS26Q9BYN8 205 aaKnown RBP9.27□□□□□ -0.93
VEGFA-218ENST00000518689 SRD5A3Q9H8P0 318 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 RETNQ9HD89 108 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 PALMDQ9NP74 551 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 MRPL27Q9P0M9 148 aaKnown RBP9.27□□□□□ -0.93
VEGFA-218ENST00000518689 STARD9Q9P2P6 4700 aa9.27□□□□□ -0.93
VEGFA-218ENST00000518689 CTDSP2O14595 271 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 SCAF4O95104 1147 aaKnown RBP9.26□□□□□ -0.93
VEGFA-218ENST00000518689 IGKV1-5P01602 117 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 CD74P04233 296 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 IFNA6P05013 189 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 P0C879 139 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 TBPP20226 339 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 IZUMO4Q1ZYL8 232 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 SPSB3Q6PJ21 355 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 ARRDC1Q8N5I2 433 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 OR2C3Q8N628 320 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 OR1P1Q8NH06 330 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 TMEM190Q8WZ59 177 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 ZNF486Q96H40 463 aaPredicted RBP9.26□□□□□ -0.93
VEGFA-218ENST00000518689 TP53RKQ96S44 253 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 C21orf62Q9NYP8 219 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 UFC1Q9Y3C8 167 aa9.26□□□□□ -0.93
VEGFA-218ENST00000518689 TRAV25A0A0B4J276 109 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 I3L2K1 104 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 CTSGP08311 255 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 PGAM2P15259 253 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 PIGPP57054 158 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 HSPE1P61604 102 aaKnown RBP9.25□□□□□ -0.93
VEGFA-218ENST00000518689 PRCDQ00LT1 54 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 GPR141Q7Z602 305 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 TMEM229BQ8NBD8 167 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 ZNF114Q8NC26 417 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 OR52B4Q8NGK2 314 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 OR1L6Q8NGR2 347 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 OR4A16Q8NH70 328 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 TERB2Q8NHR7 220 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 ISOC1Q96CN7 298 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 LYSTQ99698 3801 aa9.25□□□□□ -0.93
VEGFA-218ENST00000518689 RYR2Q92736 4967 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 IGHV3OR16-8A0A075B7F1 116 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 A0A0B4J293 547 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 GABARAPH6UMI1 98 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 NDUFA4O00483 81 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 PPP5CP53041 499 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 ZFAND6Q6FIF0 208 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 SLC16A13Q7RTY0 426 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 UBAC2Q8NBM4 344 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 C15orf40Q8WUR7 153 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 C5orf66Q9H5L9 145 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 DAZ1Q9NQZ3 744 aaKnown RBP9.24□□□□□ -0.93
VEGFA-218ENST00000518689 SACSQ9NZJ4 4579 aa9.24□□□□□ -0.93
VEGFA-218ENST00000518689 C3orf85A0A1B0GTC6 90 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 K7EMT4 169 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 RGS5O15539 181 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 RAB3DO95716 219 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 IGHV3-48P01763 117 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 FCGR2BP31994 310 aaPredicted RBP9.23□□□□□ -0.93
VEGFA-218ENST00000518689 TAS2R19P59542 299 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 ANKRD55Q3KP44 614 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 SP6Q3SY56 376 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 STEAP1BQ6NZ63 245 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 RBPMS2Q6ZRY4 209 aaKnown RBP9.23□□□□□ -0.93
VEGFA-218ENST00000518689 OR13C8Q8NGS7 320 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 MARCH1Q8TCQ1 289 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 DYNC2LI1Q8TCX1 351 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 MISP3Q96FF7 219 aa9.23□□□□□ -0.93
VEGFA-218ENST00000518689 GAR1Q9NY12 217 aaKnown RBP9.23□□□□□ -0.93
VEGFA-218ENST00000518689 A0A0G2JRQ6 117 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 C15orf62A8K5M9 175 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 TSPAN4O14817 238 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 ZNF207O43670 478 aaKnown RBP9.22□□□□□ -0.93
VEGFA-218ENST00000518689 MT-CO2P00403 227 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 UCP1P25874 307 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 MFAP4P55083 255 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 SSBP1Q04837 148 aaKnown RBP9.22□□□□□ -0.93
VEGFA-218ENST00000518689 Q56UQ5 140 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 SPINK9Q5DT21 86 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 FAAP20Q6NZ36 180 aa9.22□□□□□ -0.93
VEGFA-218ENST00000518689 CLVS1Q8IUQ0 354 aaPredicted RBP9.22□□□□□ -0.93
VEGFA-218ENST00000518689 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms