RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 C17orf51A8MQB3 221 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 SHISA9B4DS77 424 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 H3BML4 177 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 M0QZQ0 153 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 WNT10BO00744 389 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 TNFSF14O43557 240 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 CHST1O43916 411 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 SSSCA1O60232 199 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 MPDU1O75352 247 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 NDUFB4O95168 129 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 MT-ATP8P03928 68 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 SCTP09683 121 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 C8orf89P0DMQ9 161 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 CPMP14384 443 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 NPPBP16860 134 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 CST5P28325 142 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 GLRXP35754 106 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 MPV17P39210 176 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 OPRK1P41145 380 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 CCL23P55773 120 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 RPL31P62899 125 aaKnown RBP3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 WFDC2Q14508 124 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZIC1Q15915 447 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF141Q15928 474 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 RTL8BQ17RB0 113 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 MS4A18Q3C1V0 323 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 NMSQ5H8A3 153 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 DMRTC1Q5HYR2 192 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 UTF1Q5T230 341 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 LINC01545Q5VT33 79 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 LCN12Q6JVE5 192 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 SSX8Q7RTT4 187 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 PRSS41Q7RTY9 318 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 MOB3BQ86TA1 216 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 OSR2Q8N2R0 312 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 FAM19A2Q8N3H0 131 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 RAB42Q8N4Z0 105 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 RFLNBQ8N5W9 214 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF525Q8N782 197 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 NUP35Q8NFH5 326 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 ZNF721Q8TF20 911 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 CT55Q8WUE5 264 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 PRELID3AQ96N28 172 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 TTTY10Q9BZA0 68 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 ULBP3Q9BZM4 244 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 OR2H1Q9GZK4 316 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 IMUPQ9GZP8 106 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 C20orf141Q9NUB4 165 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 HRASLS2Q9NWW9 162 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 KLF12Q9Y4X4 402 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 DOCK8Q8NF50 2099 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 COL5A3P25940 1745 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 GREB1Q4ZG55 1949 aa3.97□□□□□ -1.77
HMGB1P19-201ENST00000517578 XIRP1Q702N8 1843 aaKnown RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 DENND4CQ5VZ89 1909 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TRAV5A0A0B4J249 113 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 PRSS29PA6NIE9 313 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 FOXI3A8MTJ6 420 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 BMPR1BO00238 502 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 PLPP1O14494 284 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 RS1O15537 224 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TNFSF12O43508 249 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 LYPD3O95274 346 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TNFRSF6BO95407 300 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TIMP1P01033 207 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 LGALS2P05162 132 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 CSN3P07498 182 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 ASAH2BP0C7U1 165 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 NHLRC4P0CG21 123 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 SCGB1C2P0DMR2 95 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 HLA-DRB4P13762 266 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 DAP3P51398 398 aaKnown RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TMEM50BP56557 158 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 POLR2LP62875 67 aaKnown RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 UNC119Q13432 240 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 RNPS1Q15287 305 aaKnown RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 ZNF726P1Q15940 193 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 KIAA1644Q3SXP7 199 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 RBPMS2Q6ZRY4 209 aaKnown RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 C2orf91Q6ZV80 131 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 FAM19A5Q7Z5A7 132 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TEN1Q86WV5 123 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TMEM178AQ8NBL3 297 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 OR4C13Q8NGP0 309 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 KIR2DL5BQ8NHK3 375 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 OCC1Q8TAD7 63 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 RDH5Q92781 318 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 HOXB13Q92826 284 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 DLX4Q92988 240 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 RASL11BQ9BPW5 248 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TMEM147Q9BVK8 224 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 SLC25A2Q9BXI2 301 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 KCNK15Q9H427 330 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 TNFRSF19Q9NS68 423 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 PSENENQ9NZ42 101 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 V9GYY9 64 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 HLA-DRB4X5D2U9 266 aa3.96□□□□□ -1.78
HMGB1P19-201ENST00000517578 MGAMO43451 1857 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms