RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 HIST1H2BDP58876 126 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST1H2BCP62807 126 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HTR4Q13639 388 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST2H2BEQ16778 126 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 SCGB2B2Q4G0G5 96 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 RASL11AQ6T310 242 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HRCT1Q6UXD1 115 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 OR52R1Q8NGF1 315 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 OR13C4Q8NGS5 318 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 UBALD1Q8TB05 177 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST1H2BHQ93079 126 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 CGREF1Q99674 301 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST1H2BNQ99877 126 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST1H2BMQ99879 126 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 DOHHQ9BU89 302 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 C16orf95Q9H693 158 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 IL36BQ9NZH7 164 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 ZNF835Q9Y2P0 537 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 NUBP2Q9Y5Y2 271 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 EPRSP07814 1512 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 UACAQ9BZF9 1416 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 CCNB3Q8WWL7 1395 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 ZNF646O15015 1829 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 IGKV6D-41A0A0C4DH26 115 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 LOC102725191A0A1B0GVB3 256 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 C19orf71A6NCJ1 209 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 BUB1B-PAK6H3BSN5 160 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 J3KT08 172 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 CST8O60676 142 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 WISP3O95389 354 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 PRM2P04554 102 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 MPV17P39210 176 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 CSN1S1P47710 185 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 CCL20P78556 96 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 ZFP2Q6ZN57 461 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 LCA10Q71F78 164 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 ADAT3Q96EY9 351 aaPredicted RBP3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 DERL1Q9BUN8 251 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 TRAPPC1Q9Y5R8 145 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 RAPGEF6Q8TEU7 1601 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 REREQ9P2R6 1566 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 DICER1Q9UPY3 1922 aaKnown RBP3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 NLRC5Q86WI3 1866 aa3.54□□□□□ -1.84
CTNNA1-202ENST00000517533 TECPR2O15040 1411 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 UHRF1BP1Q6BDS2 1440 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 RRBP1Q9P2E9 1410 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 DOCK6Q96HP0 2047 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 IGKV1D-37A0A075B6S9 117 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 DUXBA0A1W2PPF3 345 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 H7BYZ3 331 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 BPGMP07738 259 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 LPAR6P43657 344 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 ZNF816Q0VGE8 651 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 LDLRAD2Q5SZI1 272 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 FKBP1CQ5VVH2 108 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 SLC25A34Q6PIV7 304 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 CLVS1Q8IUQ0 354 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 NUP35Q8NFH5 326 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 FNDC9Q8TBE3 224 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 DCANP1Q8TF63 244 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 C2orf50Q96LR7 162 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 IMUPQ9GZP8 106 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 TRAPPC2LQ9UL33 140 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 CLASP1Q7Z460 1538 aa3.53□□□□□ -1.84
CTNNA1-202ENST00000517533 MYOM3Q5VTT5 1437 aa3.53□□□□□ -1.85
CTNNA1-202ENST00000517533 CFAP43Q8NDM7 1665 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 SHROOM2Q13796 1616 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 ZCCHC11Q5TAX3 1644 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 BRWD3Q6RI45 1802 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 TRAV36DV7A0A075B6V5 113 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 A0A1B0GW54 56 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 RFPL4AA6NLU0 287 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 A8MWP6 167 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 C1orf196B1AJZ1 125 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 RFPL4AL1F8VTS6 287 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 BET1O15155 118 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 LEPROTO15243 131 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 LY6HO94772 140 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 GADD45GO95257 159 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 ZNF286BP0CG31 522 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 SLC25A16P16260 332 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 CRHBPP24387 322 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 RPL27AP46776 148 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 INSL3P51460 131 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 FUT5Q11128 374 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 LYRM7Q5U5X0 104 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 RPL22L1Q6P5R6 122 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 RNF175Q8N4F7 328 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 RNASE11Q8TAA1 199 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 ZC2HC1AQ96GY0 325 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 SEC22CQ9BRL7 303 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 OR2J1Q9GZK6 312 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 EHBP1L1Q8N3D4 1523 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 DSCAMO60469 2012 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 OTOFQ9HC10 1997 aa3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 SUPT6HQ7KZ85 1726 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-202ENST00000517533 ATP10BO94823 1461 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms