RNA–Protein interactions for RNA: ENST00000516336.1

RNU6-1225P-201, Transcript of RNA, U6 small nuclear 1225, pseudogene, humanhuman

BASIC

Gene RNU6-1225P, Length 65 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1225P-201ENST00000516336 HIST1H2BCP62807 126 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 HBA1P69905 142 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ZNF345Q14585 488 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 CDK5R1Q15078 307 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 HIST2H2BEQ16778 126 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 RPL22L1Q6P5R6 122 aaKnown RBP1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 UNQ6190/PRO20217Q6UXQ8 127 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 C20orf196Q8IYI0 205 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 LRRC25Q8N386 305 aaPredicted RBP1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ZNF439Q8NDP4 499 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 MCFD2Q8NI22 146 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 RASSF5Q8WWW0 418 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 C11orf40Q8WZ69 217 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 HIST1H2BHQ93079 126 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 TMEM106AQ96A25 262 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 HIST1H2BNQ99877 126 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 HIST1H2BMQ99879 126 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 RETNLBQ9BQ08 111 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ADAT1Q9BUB4 502 aaKnown RBP1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 VPS29Q9UBQ0 182 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 PTPRBP23467 1997 aa1.26□□□□□ -2.21
RNU6-1225P-201ENST00000516336 CCDC88CQ9P219 2028 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 FAAHO00519 579 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 CHP2O43745 196 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 IGKV1-5P01602 117 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 SNRPD2P62316 118 aaKnown RBP1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 STX5Q13190 355 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ITGB3BPQ13352 177 aaPredicted RBP1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ACOT6Q3I5F7 207 aaPredicted RBP1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 C15orf53Q8NAA6 179 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 OR8J2Q8NGG1 315 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 YIPF3Q9GZM5 350 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 COMMD5Q9GZQ3 224 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 PRTFDC1Q9NRG1 225 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 FBXL12Q9NXK8 326 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 TP73-AS1Q9UF72 201 aa1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 SOX21Q9Y651 276 aaPredicted RBP1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 PRRC2BQ5JSZ5 2229 aaKnown RBP1.25□□□□□ -2.21
RNU6-1225P-201ENST00000516336 SETD5Q9C0A6 1442 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 TTC21AQ8NDW8 1320 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 IGKV2-40A0A087WW87 121 aaPredicted RBP1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 IGKV2D-40P01614 121 aaPredicted RBP1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 CLPSP04118 112 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 RPL5P46777 297 aaKnown RBP1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 RUNX1Q01196 453 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 KCNJ8Q15842 424 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 LCN15Q6UWW0 184 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 AAED1Q7RTV5 226 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 Q8N2B8 174 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ANKRD29Q8N6D5 301 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 WFDC11Q8NEX6 87 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 OR13C4Q8NGS5 318 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 CCDC42Q96M95 316 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 C11orf68Q9H3H3 251 aaKnown RBP1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ZFHX2Q9C0A1 2572 aaPredicted RBP1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 RTTNQ86VV8 2226 aa1.24□□□□□ -2.21
RNU6-1225P-201ENST00000516336 CLDN24A6NM45 220 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 TMEM212A6NML5 194 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 LYPLA2O95372 231 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 SPANXN3Q5MJ09 141 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 BPIFA4PQ86YQ2 179 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 CLDN22Q8N7P3 220 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 SCGB3A1Q96QR1 104 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 NIPSNAP1Q9BPW8 284 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 MED9Q9NWA0 146 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 MRPL27Q9P0M9 148 aaKnown RBP1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 WRNQ14191 1432 aaPredicted RBP eCLIP1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 GREB1Q4ZG55 1949 aa1.23□□□□□ -2.21
RNU6-1225P-201ENST00000516336 MTUS2Q5JR59 1369 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 GLI3P10071 1580 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 IGKV3-7A0A075B6H7 116 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 DPRXA6NFQ7 191 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 SERPINA6P08185 405 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 RPS17P08708 135 aaKnown RBP1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 DEFA1P59665 94 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 RPS20P60866 119 aaKnown RBP1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ZNF846Q147U1 533 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 SURF2Q15527 256 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 SPOPLQ6IQ16 392 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 LPCAT3Q6P1A2 487 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 CLVS1Q8IUQ0 354 aaPredicted RBP1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 TRAPPC5Q8IUR0 188 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 PFN4Q8NHR9 129 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 DCUN1D1Q96GG9 259 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 C8orf76Q96K31 380 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 ULBP3Q9BZM4 244 aa1.22□□□□□ -2.21
RNU6-1225P-201ENST00000516336 MED13Q9UHV7 2174 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 EXOC1LA0A1B0GW35 172 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 PQLC2LA1A4F0 135 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 OR4C46A6NHA9 309 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 OMPP47874 163 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 CEBPGP53567 150 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 C10orf55Q5SWW7 151 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 TOMM6Q96B49 74 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 TSPAN32Q96QS1 320 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 GINS4Q9BRT9 223 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 CKLFQ9UBR5 152 aa1.21□□□□□ -2.22
RNU6-1225P-201ENST00000516336 TMEM56-RWDD3S4R434 201 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms