RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 CD3DP04234 171 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 DEFA4P12838 97 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 CD81P60033 236 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 ERVK-16P61578 105 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 GTSCR1Q86UQ5 136 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 SLC38A6Q8IZM9 456 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 DEFB125Q8N687 156 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 UXS1Q8NBZ7 420 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 ZNF114Q8NC26 417 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 OR5B3Q8NH48 314 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 SCARB1Q8WTV0 552 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 TMEM190Q8WZ59 177 aa10.97□□□□□ -0.65
SGCA-211ENST00000514934 IGHV3-35A0A0C4DH35 117 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 PI3P19957 117 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 ELLP55199 621 aaPredicted RBP10.96□□□□□ -0.65
SGCA-211ENST00000514934 IZUMO4Q1ZYL8 232 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 RNASE12Q5GAN4 147 aaKnown RBP10.96□□□□□ -0.65
SGCA-211ENST00000514934 LPCAT3Q6P1A2 487 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 OR2C3Q8N628 320 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 TP53RKQ96S44 253 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 ATP6V0BQ99437 205 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 ZMAT4Q9H898 229 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 RETNQ9HD89 108 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 EXTL2Q9UBQ6 330 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 PRNDQ9UKY0 176 aa10.96□□□□□ -0.65
SGCA-211ENST00000514934 I3L2K1 104 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 CTDSP2O14595 271 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 TSPAN5P62079 268 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 FAM106AQ4KMX7 169 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 PVRIGQ6DKI7 326 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 MZT2AQ6P582 158 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 BTNL8Q6UX41 500 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 ARRDC1Q8N5I2 433 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 DYNC2LI1Q8TCX1 351 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 DYNLRB2Q8TF09 96 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 SPATA25Q9BR10 227 aa10.95□□□□□ -0.66
SGCA-211ENST00000514934 IGHV3-21A0A0B4J1V1 117 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 A0A0B4J293 547 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 OR2T8A6NH00 312 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 CTSGP08311 255 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 TBPP20226 339 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 FCGR2BP31994 310 aaPredicted RBP10.94□□□□□ -0.66
SGCA-211ENST00000514934 PRCDQ00LT1 54 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 ZNF57Q68EA5 555 aaPredicted RBP10.94□□□□□ -0.66
SGCA-211ENST00000514934 SLC25A24Q6NUK1 477 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 TMEM229BQ8NBD8 167 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 OR1P1Q8NH06 330 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 AP3S1Q92572 193 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 BSCL2Q96G97 398 aaPredicted RBP10.94□□□□□ -0.66
SGCA-211ENST00000514934 ZNF486Q96H40 463 aaPredicted RBP10.94□□□□□ -0.66
SGCA-211ENST00000514934 C21orf62Q9NYP8 219 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 AGRNO00468 2067 aa10.94□□□□□ -0.66
SGCA-211ENST00000514934 A0A0G2JRQ6 117 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 ZNF320A2RRD8 509 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 OR11H12B2RN74 326 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 FAM25AB3EWG3 89 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 FAM25CB3EWG5 89 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 FAM25GB3EWG6 89 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 INS-IGF2F8WCM5 200 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 SNAPC5O75971 98 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 PIGPP57054 158 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 RNASE10Q5GAN6 216 aaKnown RBP10.93□□□□□ -0.66
SGCA-211ENST00000514934 PLET1Q6UQ28 207 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 MARC2Q969Z3 335 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 HINT2Q9BX68 163 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 SRD5A3Q9H8P0 318 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 SLC2A8Q9NY64 477 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 FKBP11Q9NYL4 201 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 THYN1Q9P016 225 aa10.93□□□□□ -0.66
SGCA-211ENST00000514934 MRPL27Q9P0M9 148 aaKnown RBP10.93□□□□□ -0.66
SGCA-211ENST00000514934 GABARAPH6UMI1 98 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 SCAF4O95104 1147 aaKnown RBP10.92□□□□□ -0.66
SGCA-211ENST00000514934 UCP1P25874 307 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 HSPE1P61604 102 aaKnown RBP10.92□□□□□ -0.66
SGCA-211ENST00000514934 GUCA2BQ16661 112 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 AARDQ4LEZ3 155 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 FAAP20Q6NZ36 180 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 SPSB3Q6PJ21 355 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 OR13C8Q8NGS7 320 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 TERB2Q8NHR7 220 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 LHFPL5Q8TAF8 219 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 SMIM4Q8WVI0 70 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 SOSTQ9BQB4 213 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 C5orf66Q9H5L9 145 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 TUBA4BQ9H853 241 aa10.92□□□□□ -0.66
SGCA-211ENST00000514934 TRAV25A0A0B4J276 109 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 NDUFA4O00483 81 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 PPP5CP53041 499 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 SSBP1Q04837 148 aaKnown RBP10.91□□□□□ -0.66
SGCA-211ENST00000514934 Q6ZRM9 215 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 OR10C1Q96KK4 312 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 TMEM56Q96MV1 263 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 RTBDNQ9BSG5 229 aaPredicted RBP10.91□□□□□ -0.66
SGCA-211ENST00000514934 SLIRPQ9GZT3 109 aaKnown RBP10.91□□□□□ -0.66
SGCA-211ENST00000514934 GAR1Q9NY12 217 aaKnown RBP10.91□□□□□ -0.66
SGCA-211ENST00000514934 CCDC59Q9P031 241 aaKnown RBP10.91□□□□□ -0.66
SGCA-211ENST00000514934 UFC1Q9Y3C8 167 aa10.91□□□□□ -0.66
SGCA-211ENST00000514934 IGHV3OR16-8A0A075B7F1 116 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms