RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 NOL4LQ96MY1 436 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 HIPK2Q9H2X6 1198 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 ENY2Q9NPA8 101 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 WSB1Q9Y6I7 421 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 U3KQ87 197 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 TENM1Q9UKZ4 2725 aa9.38□□□□□ -0.91
PDLIM5-220ENST00000514830 TRBV9A0A0B4J1U6 114 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 PSMB11A5LHX3 300 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 CEBPZOSA8MTT3 80 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 K7EPK0 472 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 CYB5BO43169 146 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 SOX15O60248 233 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 TSC22D2O75157 780 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 ELANEP08246 267 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 PET100P0DJ07 73 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 LYL1P12980 280 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 HIST1H1BP16401 226 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 PSMB8P28062 276 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 POLR2GP62487 172 aaKnown RBP eCLIP9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 SRSF2Q01130 221 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 FOXE3Q13461 319 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 RAB32Q13637 225 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 ECSCRQ19T08 205 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 KRTAP24-1Q3LI83 254 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 C2orf83Q53S99 150 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 TEX38Q6PEX7 206 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 NOXA1Q86UR1 476 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 MYOZ3Q8TDC0 251 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 PPP1R1CQ8WVI7 109 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 WFDC12Q8WWY7 111 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 HINT2Q9BX68 163 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 SLA2Q9H6Q3 261 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 HEYLQ9NQ87 328 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 RNF114Q9Y508 228 aa9.37□□□□□ -0.91
PDLIM5-220ENST00000514830 IGLV11-55A0A075B6I3 123 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 WRBO00258 174 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 DEDDO75618 318 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 MPC2O95563 127 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 TMEM50AO95807 157 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 RNASE2P10153 161 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 MDKP21741 143 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 SNCAP37840 140 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 SUB1P53999 127 aaKnown RBP eCLIP9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 PAX9P55771 341 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 RPP30P78346 268 aaKnown RBP9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 FGL1Q08830 312 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 CENPVQ7Z7K6 275 aaPredicted RBP9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 KLHDC1Q8N7A1 406 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 SLC24A4Q8NFF2 622 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 FANCD2OSQ96PS1 177 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 P2RX4Q99571 388 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 MAGT1Q9H0U3 335 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
PDLIM5-220ENST00000514830 A0A1B0GVG6 124 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 CORTO00230 105 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 SSSCA1O60232 199 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 SCAF4O95104 1147 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 NXPH3O95157 252 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 SCGB1D2O95969 90 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 RLN2P04090 185 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 PVALBP20472 110 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 SPINK9Q5DT21 86 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 PRSS54Q6PEW0 395 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 NECAP1Q8NC96 275 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 OR5T1Q8NG75 326 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 TAF15Q92804 592 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 WDR89Q96FK6 387 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 DMRT1Q9Y5R6 373 aa9.35□□□□□ -0.91
PDLIM5-220ENST00000514830 FAM223BA6NKX1 122 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 E5RGE8 158 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 H0YIZ8 118 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 REG1AP05451 166 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 APELAP0DMC3 54 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 NPY1RP25929 384 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 MFAP2P55001 183 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 RPL23AP62750 156 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 TMEM14EPQ6UXP3 125 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 FAM223AQ8IWN6 122 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 OR5AU1Q8NGC0 362 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 OR4X2Q8NGF9 303 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 RNASEH2CQ8TDP1 164 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 TMEM170AQ8WVE7 144 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 USMG5Q96IX5 58 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 ST6GAL2Q96JF0 529 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 ATP6V0BQ99437 205 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 RNF126Q9BV68 326 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 LYRM2Q9NU23 88 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 THYN1Q9P016 225 aa9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 LSM5Q9Y4Y9 91 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-220ENST00000514830 A0A0G2JLM5 398 aa9.33□□□□□ -0.92
PDLIM5-220ENST00000514830 C15orf62A8K5M9 175 aa9.33□□□□□ -0.92
PDLIM5-220ENST00000514830 G3V3Q6 166 aa9.33□□□□□ -0.92
PDLIM5-220ENST00000514830 L7N2F9 121 aa9.33□□□□□ -0.92
PDLIM5-220ENST00000514830 IFNA10P01566 189 aa9.33□□□□□ -0.92
PDLIM5-220ENST00000514830 IAPPP10997 89 aa9.33□□□□□ -0.92
PDLIM5-220ENST00000514830 SLC25A4P12235 298 aa9.33□□□□□ -0.92
PDLIM5-220ENST00000514830 DEFA4P12838 97 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms