RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 BUB1B-PAK6H3BSN5 160 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 ZNF383Q8NA42 475 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 F5P12259 2224 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 A0A087WV48 116 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 IL17RELQ6ZVW7 336 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 NRN1Q9NPD7 142 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 LINC00527Q9UJ94 153 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 B4DEV8 164 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 PSMG4Q5JS54 123 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 BEND2Q8NDZ0 799 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 SLIRPQ9GZT3 109 aaKnown RBP6.2□□□□□ -1.42
CCDC30-214ENST00000514642 PEF1Q9UBV8 284 aaKnown RBP6.2□□□□□ -1.42
CCDC30-214ENST00000514642 RND3P61587 244 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 GOLT1AQ6ZVE7 132 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 GATAD1Q8WUU5 269 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 MESP1Q9BRJ9 268 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 GSX1Q9H4S2 264 aaPredicted RBP6.2□□□□□ -1.42
CCDC30-214ENST00000514642 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.2□□□□□ -1.42
CCDC30-214ENST00000514642 GCGP01275 180 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 PRCDQ00LT1 54 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 ICAM4Q14773 271 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 TMEM42Q69YG0 159 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 HEPN1Q6WQI6 88 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 TAF15Q92804 592 aaKnown RBP eCLIP6.2□□□□□ -1.42
CCDC30-214ENST00000514642 RLFQ13129 1914 aa6.2□□□□□ -1.42
CCDC30-214ENST00000514642 MRPL54Q6P161 138 aaKnown RBP6.19□□□□□ -1.42
CCDC30-214ENST00000514642 GPR132Q9UNW8 380 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 C17orf98A8MV24 154 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 NPIPB7O75200 414 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 IGHV3-48P01763 117 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 SNRPCP09234 159 aaKnown RBP6.19□□□□□ -1.42
CCDC30-214ENST00000514642 CD81P60033 236 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 PRTN3P24158 256 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 MEIG1Q5JSS6 88 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 SLX1AQ9BQ83 275 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 C15orf61A6NNL5 157 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 TMEM187Q14656 261 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 FGFBP3Q8TAT2 258 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 PLSCR2Q9NRY7 297 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 NUP210Q8TEM1 1887 aaPredicted RBP6.19□□□□□ -1.42
CCDC30-214ENST00000514642 CD7P09564 240 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 SPNP16150 400 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 SUMO2P61956 95 aaKnown RBP6.19□□□□□ -1.42
CCDC30-214ENST00000514642 IBA57Q5T440 356 aaKnown RBP6.19□□□□□ -1.42
CCDC30-214ENST00000514642 ZFC3H1O60293 1989 aaKnown RBP6.19□□□□□ -1.42
CCDC30-214ENST00000514642 CCL1P22362 96 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 ATP6V0CP27449 155 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 FAM71F2Q6NXP2 309 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 FMC1Q96HJ9 113 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 LYZL4Q96KX0 146 aa6.19□□□□□ -1.42
CCDC30-214ENST00000514642 MBNL3Q9NUK0 354 aaKnown RBP6.19□□□□□ -1.42
CCDC30-214ENST00000514642 CXorf65A6NEN9 183 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 MLNRO43193 412 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 ARL14EPLP0DKL9 152 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 FABP4P15090 132 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 RPS11P62280 158 aaKnown RBP eCLIP6.18□□□□□ -1.42
CCDC30-214ENST00000514642 SLC25A48Q6ZT89 311 aaKnown RBP6.18□□□□□ -1.42
CCDC30-214ENST00000514642 KIR3DL3Q8N743 410 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 TSSC4Q9Y5U2 329 aaPredicted RBP6.18□□□□□ -1.42
CCDC30-214ENST00000514642 UNC13CQ8NB66 2214 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 DOCK6Q96HP0 2047 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 GREB1Q4ZG55 1949 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 FAM90A9PA6NNJ1 464 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 INSP01308 110 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 LGALS3P17931 250 aaKnown RBP6.18□□□□□ -1.42
CCDC30-214ENST00000514642 PDZD11Q5EBL8 140 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 OR8A1Q8NGG7 326 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 HIST1H2BAQ96A08 127 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 ALX4Q9H161 411 aaPredicted RBP6.18□□□□□ -1.42
CCDC30-214ENST00000514642 H3BRM9 83 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 CFHR2P36980 270 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 PGLYRP4Q96LB8 373 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 BET1LQ9NYM9 111 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 PTPRZ1P23471 2315 aaPredicted RBP6.18□□□□□ -1.42
CCDC30-214ENST00000514642 H3BTX0 84 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 HOXA3O43365 443 aaPredicted RBP6.18□□□□□ -1.42
CCDC30-214ENST00000514642 SRSF9Q13242 221 aaKnown RBP eCLIP6.18□□□□□ -1.42
CCDC30-214ENST00000514642 C2orf83Q53S99 150 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 TMEM252Q8N6L7 170 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 AMBPP02760 352 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 C1orf122Q6ZSJ8 110 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 SGMS2Q8NHU3 365 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 GLMPQ8WWB7 406 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 RAB24Q969Q5 203 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 DKK4Q9UBT3 224 aa6.18□□□□□ -1.42
CCDC30-214ENST00000514642 TRAV21A0A0B4J279 112 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 LY6HO94772 140 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 C15orf32Q32M92 178 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 SPSB4Q96A44 273 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 RNF125Q96EQ8 232 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 FUT9Q9Y231 359 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 TRAV9-2A0A087WT02 112 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 C5orf64Q2M2E5 130 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 PAQR4Q8N4S7 273 aaPredicted RBP6.17□□□□□ -1.42
CCDC30-214ENST00000514642 TFF1P04155 84 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 EGR1P18146 543 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 CCKARP32238 428 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 C9orf66Q5T8R8 295 aa6.17□□□□□ -1.42
CCDC30-214ENST00000514642 Q8TCH9 128 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms