RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CCDC122Q5T0U0 273 aa1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 Q8N2B8 174 aa1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 ZNF439Q8NDP4 499 aa1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 OR8B3Q8NGG8 313 aa1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 WDR61Q9GZS3 305 aaKnown RBP1.37□□□□□ -2.19
HMGCS1-207ENST00000514610 TONSLQ96HA7 1378 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 M0R036 132 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 SLC22A1O15245 554 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 MRPS14O60783 128 aaKnown RBP1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 C1QAP02745 245 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 RPS17P08708 135 aaKnown RBP1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 OR5G3P0C626 314 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 DEFA1P59665 94 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 UBE2IP63279 158 aaKnown RBP1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 KISS1Q15726 138 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 HIST3H3Q16695 136 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 IMPG1Q17R60 797 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 DHFR2Q86XF0 187 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 C1orf158Q8N1D5 194 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 ADAT1Q9BUB4 502 aaKnown RBP1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 BAIAP2Q9UQB8 552 aa1.36□□□□□ -2.19
HMGCS1-207ENST00000514610 WRNQ14191 1432 aaPredicted RBP eCLIP1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 IGKV3D-7A0A0C4DH55 119 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 IGKV3OR2-268A0A0C4DH90 116 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 SMIM23A6NLE4 172 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 PSMD12O00232 456 aaPredicted RBP1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 PRM2P04554 102 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 IFNA16P05015 189 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 CD79AP11912 226 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 RPS4Y1P22090 263 aaKnown RBP1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 SULT1A1P50225 295 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 MYL6P60660 151 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 CDK5R1Q15078 307 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 AADACL3Q5VUY0 350 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 SYPL2Q5VXT5 272 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 OR8J2Q8NGG1 315 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 MRPL30Q8TCC3 161 aaKnown RBP1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 CCDC42Q96M95 316 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 PPP1R2P1Q96PQ5 205 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 TP73-AS1Q9UF72 201 aa1.35□□□□□ -2.19
HMGCS1-207ENST00000514610 MYH7BA7E2Y1 1941 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 IGKV1D-43A0A0B4J1Z2 117 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 FABP5P3A8MUU1 101 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 CHP2O43745 196 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 IGKV1-5P01602 117 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 CLPSP04118 112 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 RPL5P46777 297 aaKnown RBP1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 FXYD2P54710 66 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 SNRPD2P62316 118 aaKnown RBP1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 CCL20P78556 96 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 ZNF345Q14585 488 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 KCNJ8Q15842 424 aa1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 IMP4Q96G21 291 aaKnown RBP1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 SOX21Q9Y651 276 aaPredicted RBP1.34□□□□□ -2.19
HMGCS1-207ENST00000514610 MTUS2Q5JR59 1369 aa1.34□□□□□ -2.2
HMGCS1-207ENST00000514610 SETD5Q9C0A6 1442 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 IRGMA1A4Y4 181 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HLA-DRB1P01911 266 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST1H2BOP23527 126 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST1H2BBP33778 126 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 ZNF80P51504 273 aaPredicted RBP1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST1H2BDP58876 126 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST1H2BCP62807 126 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 NDUFA5Q16718 116 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST2H2BEQ16778 126 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 IBA57Q5T440 356 aaKnown RBP1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 DCXRQ7Z4W1 244 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST1H2BHQ93079 126 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 PPP1R14BQ96C90 147 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST1H2BNQ99877 126 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST1H2BMQ99879 126 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 DERL1Q9BUN8 251 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 EML6Q6ZMW3 1958 aa1.33□□□□□ -2.2
HMGCS1-207ENST00000514610 TOPBP1Q92547 1522 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 IGKV2-40A0A087WW87 121 aaPredicted RBP1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 CLDN24A6NM45 220 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 FAAHO00519 579 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 SDCBPO00560 298 aaPredicted RBP1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 IGKV2D-40P01614 121 aaPredicted RBP1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 UBBP0CG47 229 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 HIST1H1TP22492 207 aaPredicted RBP1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 HBA1P69905 142 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 SURF2Q15527 256 aaPredicted RBP1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 TRAPPC5Q8IUR0 188 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 ANKRD29Q8N6D5 301 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 CLDN22Q8N7P3 220 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 MCFD2Q8NI22 146 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 OR52E6Q96RD3 313 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 C11orf68Q9H3H3 251 aaKnown RBP1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 PRTFDC1Q9NRG1 225 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 FBXL12Q9NXK8 326 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 DOCK3Q8IZD9 2030 aa1.32□□□□□ -2.2
HMGCS1-207ENST00000514610 DIDO1Q9BTC0 2240 aaKnown RBP1.31□□□□□ -2.2
HMGCS1-207ENST00000514610 POLEQ07864 2286 aa1.31□□□□□ -2.2
HMGCS1-207ENST00000514610 EXPH5Q8NEV8 1989 aa1.31□□□□□ -2.2
HMGCS1-207ENST00000514610 IGKV3-7A0A075B6H7 116 aa1.31□□□□□ -2.2
HMGCS1-207ENST00000514610 PMP2P02689 132 aa1.31□□□□□ -2.2
HMGCS1-207ENST00000514610 NFYAP23511 347 aaPredicted RBP1.31□□□□□ -2.2
HMGCS1-207ENST00000514610 CEBPGP53567 150 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms