RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 RBX1P62877 108 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 C1DQ13901 141 aaKnown RBP2.85□□□□□ -1.95
RFC1-216ENST00000514572 IHHQ14623 411 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 LY6EQ16553 131 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 DEFB110Q30KQ9 67 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 NCBP2-AS2Q69YL0 99 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 RPRMLQ8N4K4 120 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 ASB13Q8WXK3 278 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 TRIB3Q96RU7 358 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 SELENOSQ9BQE4 189 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 ZNF2Q9BSG1 426 aaPredicted RBP2.85□□□□□ -1.95
RFC1-216ENST00000514572 RTBDNQ9BSG5 229 aaPredicted RBP2.85□□□□□ -1.95
RFC1-216ENST00000514572 TMEM208Q9BTX3 173 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 RSPO3Q9BXY4 272 aaPredicted RBP2.85□□□□□ -1.95
RFC1-216ENST00000514572 ZNF230Q9UIE0 474 aaPredicted RBP2.85□□□□□ -1.95
RFC1-216ENST00000514572 CUBNO60494 3623 aa2.85□□□□□ -1.95
RFC1-216ENST00000514572 MED12Q93074 2177 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 LOC285095A0A1B0GVY8 99 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 OR5H14A6NHG9 310 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 LEUTXA8MZ59 168 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 H0Y980 276 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 K7ERS5 55 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 TXNDC9O14530 226 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 ARL6IP5O75915 188 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 IGKV1D-33P01593 117 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 IGKV1-33P01594 117 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 INAFM2P0DMQ5 153 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 COX6A1P12074 109 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 GABRA4P48169 554 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 SMAGPQ0VAQ4 97 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 MESTQ5EB52 335 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 PDZD11Q5EBL8 140 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 LDLRAD2Q5SZI1 272 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 ZFAND6Q6FIF0 208 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 EBLN2Q6P2I7 272 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 CYHR1Q6ZMK1 362 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 TMEM136Q6ZRR5 245 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 PAGE2Q7Z2X7 111 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 DOLPP1Q86YN1 238 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 C3orf22Q8N5N4 141 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 RNF182Q8N6D2 247 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 OR10D3Q8NH80 312 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 HAVCR2Q8TDQ0 301 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 PSMF1Q92530 271 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 RBPMSQ93062 196 aaKnown RBP2.84□□□□□ -1.95
RFC1-216ENST00000514572 SEC22CQ9BRL7 303 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 CDCA4Q9BXL8 241 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 TRIM45Q9H8W5 580 aaPredicted RBP2.84□□□□□ -1.95
RFC1-216ENST00000514572 FAM206AQ9NX38 181 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 HEY1Q9Y5J3 304 aa2.84□□□□□ -1.95
RFC1-216ENST00000514572 FREM1Q5H8C1 2179 aa2.84□□□□□ -1.96
RFC1-216ENST00000514572 PLCE1Q9P212 2302 aa2.84□□□□□ -1.96
RFC1-216ENST00000514572 EML6Q6ZMW3 1958 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 SVEP1Q4LDE5 3571 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 ALPK2Q86TB3 2170 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 ZNF729A6NN14 1252 aaPredicted RBP2.83□□□□□ -1.96
RFC1-216ENST00000514572 H3BSA7 217 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 CFL1P23528 166 aaKnown RBP2.83□□□□□ -1.96
RFC1-216ENST00000514572 FMODQ06828 376 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 TFF3Q07654 80 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 TAF1AQ15573 450 aaPredicted RBP2.83□□□□□ -1.96
RFC1-216ENST00000514572 TMEM75Q8N9X5 138 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 OR4A5Q8NH83 315 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 GALMQ96C23 342 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 PPP1R2P1Q96PQ5 205 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 DHRS9Q9BPW9 319 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 MROQ9BYG7 248 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 ZNF286AQ9HBT8 521 aa2.83□□□□□ -1.96
RFC1-216ENST00000514572 IGKV1-12A0A0C4DH73 117 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 H3BQ85 93 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 CXCR6O00574 342 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 ZNF189O75820 626 aaPredicted RBP2.82□□□□□ -1.96
RFC1-216ENST00000514572 IGKV1D-12P01611 117 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 TYMSP04818 313 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 ATP5G1P05496 136 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 KDELR1P24390 212 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 PSMB3P49720 205 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 BLVRAP53004 296 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 H2BFSP57053 126 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 DAD1P61803 113 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 MYL5Q02045 173 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 TMED2Q15363 201 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 RGS21Q2M5E4 152 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 DEFB113Q30KQ7 82 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 TRMT12Q53H54 448 aaKnown RBP2.82□□□□□ -1.96
RFC1-216ENST00000514572 TCF23Q7RTU1 214 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 SGPP2Q8IWX5 399 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 FER1L6-AS1Q8NA97 138 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 WFDC11Q8NEX6 87 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 OR51H1Q8NH63 302 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 PTH2Q96A98 100 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 APOBEC3DQ96AK3 386 aaPredicted RBP2.82□□□□□ -1.96
RFC1-216ENST00000514572 OR2V2Q96R30 315 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 GABARAPL1Q9H0R8 117 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 GTSF1LQ9H1H1 148 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 BABAM2Q9NXR7 383 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 GLS2Q9UI32 602 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 LINC00527Q9UJ94 153 aa2.82□□□□□ -1.96
RFC1-216ENST00000514572 ARL5AQ9Y689 179 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms