RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 POMKQ9H5K3 350 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF665Q9H7R5 613 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 INSL5Q9Y5Q6 135 aa5.89□□□□□ -1.47
NIPBL-208ENST00000514335 OVOL1O14753 267 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 HLA-DQA2P01906 255 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 LIFP15018 202 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 PPP1CCP36873 323 aaKnown RBP5.88□□□□□ -1.47
NIPBL-208ENST00000514335 MLF2Q15773 248 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-208ENST00000514335 SAMD5Q5TGI4 173 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 SLC25A34Q6PIV7 304 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 C18orf32Q8TCD1 76 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 RPS4Y2Q8TD47 263 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 PLEKHB2Q96CS7 222 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 STARD5Q9NSY2 213 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 TRDV1A0A1B0GX56 115 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 PRR32B1ATL7 298 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 SNCGO76070 127 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 HBE1P02100 147 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 ZGLP1P0C6A0 271 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 PIPP12273 146 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-208ENST00000514335 IGFBP6P24592 240 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-208ENST00000514335 FOXA3P55318 350 aaPredicted RBP5.88□□□□□ -1.47
NIPBL-208ENST00000514335 GAPTQ8N292 157 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 AQP3Q92482 292 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 TMEM147Q9BVK8 224 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 PKD1L2Q7Z442 2459 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 TNFP01375 233 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF286BP0CG31 522 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 OPRK1P41145 380 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 SRYQ05066 204 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 ELOCQ15369 112 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 CEACAM16Q2WEN9 425 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 NFE4Q86UQ8 179 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 C3orf22Q8N5N4 141 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF502Q8TBZ5 544 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 BMFQ96LC9 184 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 FAM19A4Q96LR4 140 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 PGLYRP2Q96PD5 576 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 NOP16Q9Y3C1 178 aaKnown RBP5.88□□□□□ -1.47
NIPBL-208ENST00000514335 OR1A2Q9Y585 309 aa5.88□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF318Q5VUA4 2279 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 GREB1Q4ZG55 1949 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 FAM24AA6NFZ4 105 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 C17orf112F2Z3M2 114 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 PITX3O75364 302 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 HOXD3P31249 432 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-208ENST00000514335 PSMB3P49720 205 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 KLF17Q5JT82 389 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-208ENST00000514335 FAM219BQ5XKK7 198 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 MSRB3Q8IXL7 192 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 LRTM2Q8N967 370 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 OR11H6Q8NGC7 330 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 OR8B3Q8NGG8 313 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 STAG3L4Q8TBR4 150 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 PLA2G2FQ9BZM2 168 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 SPANXCQ9NY87 97 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 HILPDAQ9Y5L2 63 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 TRAPPC1Q9Y5R8 145 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 TMEM150CB9EJG8 249 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 H7C1H1 209 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 DUSP14O95147 198 aaKnown RBP5.87□□□□□ -1.47
NIPBL-208ENST00000514335 APOC4P55056 127 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 MTPNP58546 118 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 SNRPFP62306 86 aaKnown RBP5.87□□□□□ -1.47
NIPBL-208ENST00000514335 FHL5Q5TD97 284 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 CD164L2Q6UWJ8 174 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 OR5H2Q8NGV7 314 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 SCGB1C1Q8TD33 95 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 BRK1Q8WUW1 75 aa5.87□□□□□ -1.47
NIPBL-208ENST00000514335 POP5Q969H6 163 aaKnown RBP5.87□□□□□ -1.47
NIPBL-208ENST00000514335 TRBV6-7A0A0A0MS04 114 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 A0A1B0GWB2 263 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 MED19A0JLT2 244 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 RBAKDNA6NC62 111 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 EPOPA6NHQ4 379 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 F2Z2F3 143 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 HLA-DRB1P01911 266 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 CBLN1P23435 193 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 LOXL3P58215 753 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 SPRNQ5BIV9 151 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 ZNF506Q5JVG8 444 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 DNM1P46Q6ZS02 220 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 COMMD6Q7Z4G1 85 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 LHFPL1Q86WI0 220 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 RPS19BP1Q86WX3 136 aaKnown RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 LINC00311Q8N616 119 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 DCAF4L2Q8NA75 395 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 SRSF12Q8WXF0 261 aaKnown RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 LSM10Q969L4 123 aaKnown RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 RNF126Q9BV68 326 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 GNB1LQ9BYB4 327 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 RPUSD1Q9UJJ7 312 aaKnown RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 WDR83OSQ9Y284 106 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 PXMP4Q9Y6I8 212 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 COL5A1P20908 1838 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 RANBP2P49792 3224 aaKnown RBP5.86□□□□□ -1.47
NIPBL-208ENST00000514335 CACNA1BQ00975 2339 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 MEIS3P1A6NDR6 274 aa5.86□□□□□ -1.47
NIPBL-208ENST00000514335 CDX4O14627 284 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms