RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 FBXO7Q9Y3I1 522 aa15.76■□□□□ 0.11
USP53-208ENST00000514305 C5orf51A6NDU8 294 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 TEX22C9J3V5 150 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 BRI3O95415 125 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 PF4V1P10720 104 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 SPNP16150 400 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 PSMB6P28072 239 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 HOXA1P49639 335 aaPredicted RBP15.75■□□□□ 0.11
USP53-208ENST00000514305 IZUMO4Q1ZYL8 232 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 AARDQ4LEZ3 155 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 KPRPQ5T749 579 aaPredicted RBP15.75■□□□□ 0.11
USP53-208ENST00000514305 GSG1LQ6UXU4 331 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 REC114Q7Z4M0 266 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 OR5T1Q8NG75 326 aa15.75■□□□□ 0.11
USP53-208ENST00000514305 CITED2Q99967 270 aaPredicted RBP15.75■□□□□ 0.11
USP53-208ENST00000514305 A0A0G2JLM5 398 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 HMX3A6NHT5 357 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 DBX1A6NMT0 343 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 CEBPZOSA8MTT3 80 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 INS-IGF2F8WCM5 200 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 ADAP1O75689 374 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 OR13C7P0DN81 318 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 SNCAP37840 140 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 CFHR3Q02985 330 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 Q6ZRM9 215 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 NOXA1Q86UR1 476 aa15.74■□□□□ 0.11
USP53-208ENST00000514305 C13orf42A0A1B0GVH6 325 aa15.73■□□□□ 0.11
USP53-208ENST00000514305 TCRBV4S1A1TA0A5B7 111 aa15.73■□□□□ 0.11
USP53-208ENST00000514305 C7orf66A4D0T2 115 aa15.73■□□□□ 0.11
USP53-208ENST00000514305 FAM25EA8MYX2 175 aa15.73■□□□□ 0.11
USP53-208ENST00000514305 WRBO00258 174 aa15.73■□□□□ 0.11
USP53-208ENST00000514305 IGLV1-40P01703 118 aa15.73■□□□□ 0.11
USP53-208ENST00000514305 CRYGCP07315 174 aa15.73■□□□□ 0.11
USP53-208ENST00000514305 IAH1Q2TAA2 248 aaPredicted RBP15.73■□□□□ 0.11
USP53-208ENST00000514305 C19orf54Q5BKX5 351 aa15.73■□□□□ 0.11
USP53-208ENST00000514305 TSSC4Q9Y5U2 329 aaPredicted RBP15.73■□□□□ 0.11
USP53-208ENST00000514305 E7EUB6 86 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 APELAP0DMC3 54 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 MYOD1P15172 320 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 CTRB1P17538 263 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 PSMB8P28062 276 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 RAB9AP51151 201 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 RPP30P78346 268 aaKnown RBP15.72■□□□□ 0.11
USP53-208ENST00000514305 CYCSP99999 105 aaKnown RBP15.72■□□□□ 0.11
USP53-208ENST00000514305 TNFRSF9Q07011 255 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 CTRB2Q6GPI1 263 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 RNF152Q8N8N0 203 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 WIPF2Q8TF74 440 aaPredicted RBP15.72■□□□□ 0.11
USP53-208ENST00000514305 USMG5Q96IX5 58 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 CIB3Q96Q77 187 aaPredicted RBP15.72■□□□□ 0.11
USP53-208ENST00000514305 HEYLQ9NQ87 328 aaPredicted RBP15.72■□□□□ 0.11
USP53-208ENST00000514305 HSPB7Q9UBY9 170 aa15.72■□□□□ 0.11
USP53-208ENST00000514305 IGLC7A0M8Q6 106 aa15.71■□□□□ 0.11
USP53-208ENST00000514305 PITX3O75364 302 aa15.71■□□□□ 0.11
USP53-208ENST00000514305 NKX2-1P43699 371 aaPredicted RBP15.71■□□□□ 0.11
USP53-208ENST00000514305 ATP5IP56385 69 aaPredicted RBP15.71■□□□□ 0.11
USP53-208ENST00000514305 CD83Q01151 205 aa15.71■□□□□ 0.11
USP53-208ENST00000514305 KHDC1LQ5JSQ8 128 aa15.71■□□□□ 0.11
USP53-208ENST00000514305 FAM209BQ5JX69 171 aa15.71■□□□□ 0.11
USP53-208ENST00000514305 ASPHD1Q5U4P2 390 aa15.71■□□□□ 0.11
USP53-208ENST00000514305 C2orf50Q96LR7 162 aa15.71■□□□□ 0.11
USP53-208ENST00000514305 GSKIPQ9P0R6 139 aa15.71■□□□□ 0.11
USP53-208ENST00000514305 CGB1A6NKQ9 187 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 FAM223BA6NKX1 122 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 PRB2P02812 416 aaPredicted RBP15.7■□□□□ 0.1
USP53-208ENST00000514305 TRGV3P03979 118 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 HTR2BP41595 481 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 TPPP2P59282 170 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 OXLD1Q5BKU9 147 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 FAM223AQ8IWN6 122 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 OR2C3Q8N628 320 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 ZBTB8BQ8NAP8 495 aaPredicted RBP15.7■□□□□ 0.1
USP53-208ENST00000514305 OR10W1Q8NGF6 305 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 MED28Q9H204 178 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 ALG5Q9Y673 324 aa15.7■□□□□ 0.1
USP53-208ENST00000514305 CORTO00230 105 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 AREGP15514 252 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 WT1-ASQ06250 92 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 SLC25A24Q6NUK1 477 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 NECAP1Q8NC96 275 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 OR1P1Q8NH06 330 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 DTD1Q8TEA8 209 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 UBE2E2Q96LR5 201 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 MS4A10Q96PG2 267 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 F11RQ9Y624 299 aaKnown RBP15.69■□□□□ 0.1
USP53-208ENST00000514305 U3KQ87 197 aa15.69■□□□□ 0.1
USP53-208ENST00000514305 A0A1B0GW64 132 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 A0A1W2PRX2 142 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 ADARB2-AS1A8MUL3 147 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 GOSR2O14653 212 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 SYNGR2O43760 224 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 SOX15O60248 233 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 REG1AP05451 166 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 CD33P20138 364 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 CDX1P47902 265 aaPredicted RBP15.68■□□□□ 0.1
USP53-208ENST00000514305 ZNF114Q8NC26 417 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 RBKSQ9H477 322 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 TNCP24821 2201 aa15.68■□□□□ 0.1
USP53-208ENST00000514305 NUDT19A8MXV4 375 aa15.67■□□□□ 0.1
USP53-208ENST00000514305 CCSO14618 274 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms