RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 SLC25A2Q9BXI2 301 aa9.21□□□□□ -0.93
CPNE4-209ENST00000512055 DENND4CQ5VZ89 1909 aa9.21□□□□□ -0.93
CPNE4-209ENST00000512055 FANCMQ8IYD8 2048 aa9.21□□□□□ -0.93
CPNE4-209ENST00000512055 TMEM14DPA8MWL7 114 aa9.21□□□□□ -0.93
CPNE4-209ENST00000512055 CDX4O14627 284 aaPredicted RBP9.21□□□□□ -0.93
CPNE4-209ENST00000512055 ZNF56Q15929 161 aa9.21□□□□□ -0.93
CPNE4-209ENST00000512055 VAX1Q5SQQ9 334 aa9.21□□□□□ -0.93
CPNE4-209ENST00000512055 DNM1P46Q6ZS02 220 aa9.21□□□□□ -0.93
CPNE4-209ENST00000512055 WDYHV1Q96HA8 205 aa9.21□□□□□ -0.93
CPNE4-209ENST00000512055 NBASA2RRP1 2371 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 TRAV9-2A0A087WT02 112 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 SERF1AO75920 110 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 ATP5LO75964 103 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 TMEM105Q8N8V8 129 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 ABHD14BQ96IU4 210 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 GPHA2Q96T91 129 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 NPVFQ9HCQ7 196 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 MPDZO75970 2070 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 SEC11AP67812 179 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 CX3CL1P78423 397 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 NHLRC3Q5JS37 347 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 TMEM211Q6ICI0 200 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 ATRAIDQ6UW56 229 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 SMIM20Q8N5G0 67 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 GPR146Q96CH1 333 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 GPR132Q9UNW8 380 aa9.21□□□□□ -0.94
CPNE4-209ENST00000512055 PHF3Q92576 2039 aaKnown RBP9.21□□□□□ -0.94
CPNE4-209ENST00000512055 RTP5Q14D33 572 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 NXT2Q9NPJ8 142 aaKnown RBP9.2□□□□□ -0.94
CPNE4-209ENST00000512055 IGHV3OR16-12A0A075B7B8 117 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 J3QT63 122 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 LGALS1P09382 135 aaKnown RBP9.2□□□□□ -0.94
CPNE4-209ENST00000512055 TMEM54Q969K7 222 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 PRNDQ9UKY0 176 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 SYNGR1O43759 233 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 CEACAM1P13688 526 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 CENPFP49454 3210 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 LOC105371242A0A075B767 164 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 PPIAL4CA0A0B4J2A2 164 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 PPIAL4GP0DN37 164 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 TNFRSF1AP19438 455 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 RRN3P1Q2M238 152 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 C2orf68Q2NKX9 166 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 GAGE2AQ6NT46 116 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 ST20Q9HBF5 79 aa9.2□□□□□ -0.94
CPNE4-209ENST00000512055 A0A1B0GTI1 187 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 RPL36A-HNRNPH2H7BZ11 118 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 GHRHP01286 108 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 PRB4P10163 310 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-209ENST00000512055 GPR6P46095 362 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-209ENST00000512055 MIC13Q5XKP0 118 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 CEACAM21Q3KPI0 293 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 C5orf66Q9H5L9 145 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 POLEQ07864 2286 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 ID1P41134 155 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 JMJD8Q96S16 334 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 ATP6V0BQ99437 205 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 SCNM1Q9BWG6 230 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 SH3BGRL3Q9H299 93 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 CXXC4Q9H2H0 198 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 SCTP09683 121 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 OR10J6PQ8NGY7 276 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 HARBI1Q96MB7 349 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 PRDM14Q9GZV8 571 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 MYOZ1Q9NP98 299 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-209ENST00000512055 TNFRSF19Q9NS68 423 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 ZNF319Q9P2F9 582 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 SLC25A10Q9UBX3 287 aaPredicted RBP9.19□□□□□ -0.94
CPNE4-209ENST00000512055 KLF12Q9Y4X4 402 aa9.19□□□□□ -0.94
CPNE4-209ENST00000512055 RPS20P60866 119 aaKnown RBP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 FHL1Q13642 323 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 P2RY6Q15077 328 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 FGF11Q92914 225 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 TRACP01848 142 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 ARL14EPLP0DKL9 152 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 SLC25A53Q5H9E4 307 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 LAMTOR1Q6IAA8 161 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 TPRX1Q8N7U7 411 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 MBNL3Q9NUK0 354 aaKnown RBP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 AMMECR1Q9Y4X0 333 aaPredicted RBP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 PLXNB3Q9ULL4 1909 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 TRAV30A0A087WSZ9 112 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 IGKV3D-20A0A0C4DH25 116 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 SS18L1O75177 396 aaPredicted RBP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 RASL11AQ6T310 242 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 SPSB4Q96A44 273 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 ERG28Q9UKR5 140 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 LOC102723996A0A087X1L8 192 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 VWC2LB2RUY7 222 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 IGFBP3P17936 291 aaPredicted RBP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 HSD52Q0P140 79 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 C2orf82Q6UX34 121 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 FAM214BQ7L5A3 538 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 TAF15Q92804 592 aaKnown RBP eCLIP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 METTL26Q96S19 204 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 MRPL20Q9BYC9 149 aaKnown RBP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 ZFP36L1Q07352 338 aaKnown RBP9.18□□□□□ -0.94
CPNE4-209ENST00000512055 C16orf92Q96LL3 132 aa9.18□□□□□ -0.94
CPNE4-209ENST00000512055 Q96M66 194 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms