RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 DMBT1Q9UGM3 2413 aaPredicted RBP13.65□□□□□ -0.22
HMGCS1-206ENST00000511774 RBFOX2O43251 390 aaKnown RBP eCLIP13.64□□□□□ -0.23
HMGCS1-206ENST00000511774 CDK2AP2O75956 126 aa13.64□□□□□ -0.23
HMGCS1-206ENST00000511774 YIF1AO95070 293 aa13.64□□□□□ -0.23
HMGCS1-206ENST00000511774 TRAPPC2P0DI81 140 aa13.64□□□□□ -0.23
HMGCS1-206ENST00000511774 TRAPPC2BP0DI82 140 aa13.64□□□□□ -0.23
HMGCS1-206ENST00000511774 SECTM1Q8WVN6 248 aa13.64□□□□□ -0.23
HMGCS1-206ENST00000511774 NDUFAF3Q9BU61 184 aa13.64□□□□□ -0.23
HMGCS1-206ENST00000511774 NDUFA4L2Q9NRX3 87 aa13.64□□□□□ -0.23
HMGCS1-206ENST00000511774 TRAV14DV4A0A0A6YYC5 116 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 IGHV3-66A0A0C4DH42 116 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 IFITM5A6NNB3 132 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 DFFBO76075 338 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 NQO2P16083 231 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 HACD4Q5VWC8 232 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 STHQ8IWL8 128 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 DCSTAMPQ9H295 470 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 VSIRQ9H7M9 311 aa13.63□□□□□ -0.23
HMGCS1-206ENST00000511774 TMEM235A6NFC5 223 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 KNCNA6PVL3 124 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 HPRT1P00492 218 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 IGHV3-48P01763 117 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 HSMCR30P0CW71 290 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 CMTM3Q96MX0 182 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 HINT2Q9BX68 163 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 ATG5Q9H1Y0 275 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 ANXA10Q9UJ72 324 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 NSG2Q9Y328 171 aa13.62□□□□□ -0.23
HMGCS1-206ENST00000511774 CYB5BO43169 146 aa13.61□□□□□ -0.23
HMGCS1-206ENST00000511774 FGF2P09038 288 aa13.61□□□□□ -0.23
HMGCS1-206ENST00000511774 C10orf67Q8IYJ2 551 aa13.61□□□□□ -0.23
HMGCS1-206ENST00000511774 DMBX1Q8NFW5 382 aa13.61□□□□□ -0.23
HMGCS1-206ENST00000511774 OR1L8Q8NGR8 309 aa13.61□□□□□ -0.23
HMGCS1-206ENST00000511774 AIFM2Q9BRQ8 373 aa13.61□□□□□ -0.23
HMGCS1-206ENST00000511774 NXF2Q9GZY0 626 aaKnown RBP13.61□□□□□ -0.23
HMGCS1-206ENST00000511774 DBX1A6NMT0 343 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 C16orf90A8MZG2 172 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 I3L2K1 104 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 DNASE2O00115 360 aaPredicted RBP13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 PAFAH1B2P68402 229 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 RELQ04864 619 aaPredicted RBP13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 TNP2Q05952 138 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 THOC7Q6I9Y2 204 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 Q8N1X5 172 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 PACRGLQ8N7B6 248 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 OR13F1Q8NGS4 319 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 OR51H1Q8NH63 302 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 LSM10Q969L4 123 aaKnown RBP13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 TBC1D24Q9ULP9 559 aa13.6□□□□□ -0.23
HMGCS1-206ENST00000511774 METTL21EPA6NDL7 271 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 ST8SIA3O43173 380 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 IFNA10P01566 189 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 FCGR2CP31995 323 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 TRAM1Q15629 374 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 MSMO1Q15800 293 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 TOMM20LQ6UXN7 152 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 SLC25A46Q96AG3 418 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 PLEKHA2Q9HB19 425 aa13.59□□□□□ -0.23
HMGCS1-206ENST00000511774 SMIM30A4D0T7 59 aa13.58□□□□□ -0.24
HMGCS1-206ENST00000511774 SPP1P10451 314 aa13.58□□□□□ -0.24
HMGCS1-206ENST00000511774 C1orf134Q5TEV5 83 aa13.58□□□□□ -0.24
HMGCS1-206ENST00000511774 UBE2UQ5VVX9 321 aa13.58□□□□□ -0.24
HMGCS1-206ENST00000511774 ZNF818PQ6ZRF7 136 aa13.58□□□□□ -0.24
HMGCS1-206ENST00000511774 RABAC1Q9UI14 185 aa13.58□□□□□ -0.24
HMGCS1-206ENST00000511774 TRAV2A0A0B4J234 112 aa13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 K7EQG2 157 aa13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 PPYP01298 95 aa13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 PSMA1P25786 263 aaKnown RBP13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 MLLT11Q13015 90 aaPredicted RBP13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 TMEM41BQ5BJD5 291 aa13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 MORN3Q6PF18 240 aaPredicted RBP13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 CENPSQ8N2Z9 138 aa13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 SLC5A7Q9GZV3 580 aa13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 ZFAND3Q9H8U3 227 aa13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 OR51B2Q9Y5P1 312 aa13.57□□□□□ -0.24
HMGCS1-206ENST00000511774 TRAV1-2A0A0B4J238 106 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 ZNF688P0C7X2 276 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 RANBP1P43487 201 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 MFAP4P55083 255 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 RPL11P62913 178 aaKnown RBP13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 UBE2DNLQ8IWF7 75 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 ZBTB34Q8NCN2 500 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 DUSP18Q8NEJ0 188 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 MISP3Q96FF7 219 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 TMEM14BQ9NUH8 114 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 COMMD9Q9P000 198 aa13.56□□□□□ -0.24
HMGCS1-206ENST00000511774 MARCH11A6NNE9 402 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 MT-CO2P00403 227 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 FXYD4P59646 89 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 CATR1Q13166 79 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 ARL6IP1Q15041 203 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 ACTL10Q5JWF8 245 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 OR1P1Q8NH06 330 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 ACOT13Q9NPJ3 140 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 SCRT2Q9NQ03 307 aa13.55□□□□□ -0.24
HMGCS1-206ENST00000511774 A0A1B0GU03 582 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 PDCD5O14737 125 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 IFNA21P01568 189 aa13.54□□□□□ -0.24
HMGCS1-206ENST00000511774 IFNA17P01571 189 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms