RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 LPCAT3Q6P1A2 487 aa11.42□□□□□ -0.58
COL1A1-213ENST00000511732 OR5B3Q8NH48 314 aa11.42□□□□□ -0.58
COL1A1-213ENST00000511732 BSCL2Q96G97 398 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-213ENST00000511732 C5orf66Q9H5L9 145 aa11.42□□□□□ -0.58
COL1A1-213ENST00000511732 FAM212BQ9NTI7 297 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-213ENST00000511732 PRNDQ9UKY0 176 aa11.42□□□□□ -0.58
COL1A1-213ENST00000511732 IGHV3OR16-8A0A075B7F1 116 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 M0QYG6 137 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 SMIM18P0DKX4 95 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 RORCP51449 518 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 CTF1Q16619 201 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 RNASE12Q5GAN4 147 aaKnown RBP11.41□□□□□ -0.58
COL1A1-213ENST00000511732 RBPMS2Q6ZRY4 209 aaKnown RBP11.41□□□□□ -0.58
COL1A1-213ENST00000511732 UBAC2Q8NBM4 344 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 OR1L6Q8NGR2 347 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 TMEM56Q96MV1 263 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 FKBP11Q9NYL4 201 aa11.41□□□□□ -0.58
COL1A1-213ENST00000511732 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 NDUFA4O00483 81 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 CTSGP08311 255 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 ANKRD55Q3KP44 614 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 SPSB3Q6PJ21 355 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 LHFPL1Q86WI0 220 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 SLC38A6Q8IZM9 456 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 OR2C3Q8N628 320 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 MRGPRFQ96AM1 343 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 ATP6V0BQ99437 205 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 TSC22D3Q99576 134 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 OVOL2Q9BRP0 275 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 GGTLC1Q9BX51 225 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 DAZ1Q9NQZ3 744 aaKnown RBP11.4□□□□□ -0.58
COL1A1-213ENST00000511732 KLK11Q9UBX7 282 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 UBQLN2Q9UHD9 624 aa11.4□□□□□ -0.58
COL1A1-213ENST00000511732 LOC102724200A0A096LPH7 203 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-213ENST00000511732 FAM25AB3EWG3 89 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 FAM25CB3EWG5 89 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 FAM25GB3EWG6 89 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 I3L2K1 104 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 ZNF207O43670 478 aaKnown RBP11.39□□□□□ -0.59
COL1A1-213ENST00000511732 GABARAPO95166 117 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 IZUMO4Q1ZYL8 232 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 Q56UQ5 140 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 H2BFWTQ7Z2G1 175 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 OR1P1Q8NH06 330 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 OR52I2Q8NH67 350 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 ABHD1Q96SE0 405 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 SPAG8Q99932 426 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-213ENST00000511732 C20orf24Q9BUV8 137 aa11.39□□□□□ -0.59
COL1A1-213ENST00000511732 K7EMT4 169 aa11.38□□□□□ -0.59
COL1A1-213ENST00000511732 TSPAN4O14817 238 aa11.38□□□□□ -0.59
COL1A1-213ENST00000511732 PI3P19957 117 aa11.38□□□□□ -0.59
COL1A1-213ENST00000511732 S100GP29377 79 aa11.38□□□□□ -0.59
COL1A1-213ENST00000511732 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
COL1A1-213ENST00000511732 ZNF114Q8NC26 417 aa11.38□□□□□ -0.59
COL1A1-213ENST00000511732 OR4A16Q8NH70 328 aa11.38□□□□□ -0.59
COL1A1-213ENST00000511732 EXTL2Q9UBQ6 330 aa11.38□□□□□ -0.59
COL1A1-213ENST00000511732 IGKV1-5P01602 117 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 IGHV3-48P01763 117 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 CD3DP04234 171 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 ZNF182P17025 639 aaPredicted RBP11.37□□□□□ -0.59
COL1A1-213ENST00000511732 RND3P61587 244 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 HSPE1P61604 102 aaKnown RBP11.37□□□□□ -0.59
COL1A1-213ENST00000511732 PLECQ15149 4684 aaKnown RBP11.37□□□□□ -0.59
COL1A1-213ENST00000511732 ODF3L2Q3SX64 289 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 SPINK9Q5DT21 86 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 OR4D10Q8NGI6 311 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 MISP3Q96FF7 219 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 TP53RKQ96S44 253 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 MTFP1Q9UDX5 166 aa11.37□□□□□ -0.59
COL1A1-213ENST00000511732 C15orf62A8K5M9 175 aa11.36□□□□□ -0.59
COL1A1-213ENST00000511732 MT-CO2P00403 227 aa11.36□□□□□ -0.59
COL1A1-213ENST00000511732 CTSDP07339 412 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-213ENST00000511732 P0C879 139 aa11.36□□□□□ -0.59
COL1A1-213ENST00000511732 FCGR2BP31994 310 aaPredicted RBP11.36□□□□□ -0.59
COL1A1-213ENST00000511732 PIGPP57054 158 aa11.36□□□□□ -0.59
COL1A1-213ENST00000511732 RNASE10Q5GAN6 216 aaKnown RBP11.36□□□□□ -0.59
COL1A1-213ENST00000511732 GPR107Q5VW38 600 aa11.36□□□□□ -0.59
COL1A1-213ENST00000511732 LAMTOR1Q6IAA8 161 aa11.36□□□□□ -0.59
COL1A1-213ENST00000511732 MIXL1Q9H2W2 232 aa11.36□□□□□ -0.59
COL1A1-213ENST00000511732 SMPXQ9UHP9 88 aa11.36□□□□□ -0.59
COL1A1-213ENST00000511732 IGHV3-49A0A0A0MS15 119 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 A0A0B4J293 547 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 PGAM2P15259 253 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 MFAP4P55083 255 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 ARRDC1Q8N5I2 433 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 IL17DQ8TAD2 202 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 AP3S1Q92572 193 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 PINX1Q96BK5 328 aaKnown RBP11.35□□□□□ -0.59
COL1A1-213ENST00000511732 ZNF486Q96H40 463 aaPredicted RBP11.35□□□□□ -0.59
COL1A1-213ENST00000511732 OR10C1Q96KK4 312 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 RNF2Q99496 336 aa11.35□□□□□ -0.59
COL1A1-213ENST00000511732 NXF2Q9GZY0 626 aaKnown RBP11.35□□□□□ -0.59
COL1A1-213ENST00000511732 EPPK1P58107 5090 aaKnown RBP11.35□□□□□ -0.59
COL1A1-213ENST00000511732 IGHV7-4-1A0A0J9YVY3 117 aa11.34□□□□□ -0.59
COL1A1-213ENST00000511732 CHEK1O14757 476 aa11.34□□□□□ -0.59
COL1A1-213ENST00000511732 NUPL2O15504 423 aaKnown RBP11.34□□□□□ -0.59
COL1A1-213ENST00000511732 PPP5CP53041 499 aa11.34□□□□□ -0.59
COL1A1-213ENST00000511732 ERHP84090 104 aaKnown RBP11.34□□□□□ -0.59
COL1A1-213ENST00000511732 SP6Q3SY56 376 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms