RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CYSTM1Q9H1C7 97 aa1.07□□□□□ -2.24
TRAPPC11-207ENST00000511409 MAST2Q6P0Q8 1798 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 BAZ2BQ9UIF8 2168 aaKnown RBP1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 CCDC88AQ3V6T2 1871 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 IBA57-AS1B1ANH7 110 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 HLA-DRB1P01911 266 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 SULT1A1P50225 295 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 HBA1P69905 142 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 RUNX1Q01196 453 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 ZNF345Q14585 488 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 IBA57Q5T440 356 aaKnown RBP1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 SYPL2Q5VXT5 272 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 RPL22L1Q6P5R6 122 aaKnown RBP1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 ALKAL1Q6UXT8 129 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 BPIFA4PQ86YQ2 179 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 LINC00471Q8N535 108 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 ANKRD29Q8N6D5 301 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 C9orf163Q8N9P6 203 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 C11orf40Q8WZ69 217 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 IMP4Q96G21 291 aaKnown RBP1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 DERL1Q9BUN8 251 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 COMMD5Q9GZQ3 224 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 PKIGQ9Y2B9 76 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 NOSIPQ9Y314 301 aaKnown RBP1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 TTC21AQ8NDW8 1320 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 MYOFQ9NZM1 2061 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 FBN3Q75N90 2809 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 LAMB2P55268 1798 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 SETD5Q9C0A6 1442 aa1.06□□□□□ -2.24
TRAPPC11-207ENST00000511409 IGKV3-7A0A075B6H7 116 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 PSME3P61289 254 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 STX5Q13190 355 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 OR2F1Q13607 317 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 KISS1Q15726 138 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 UNQ6190/PRO20217Q6UXQ8 127 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 C20orf196Q8IYI0 205 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 LRRC25Q8N386 305 aaPredicted RBP1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 TMEM86BQ8N661 226 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 RASSF5Q8WWW0 418 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 CCDC42Q96M95 316 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 PPP1R2P1Q96PQ5 205 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 OR52E6Q96RD3 313 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 GINS4Q9BRT9 223 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 YIPF3Q9GZM5 350 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 PRTFDC1Q9NRG1 225 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 LHFPL6Q9Y693 200 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 ADCY9O60503 1353 aa1.05□□□□□ -2.24
TRAPPC11-207ENST00000511409 IGKV1D-43A0A0B4J1Z2 117 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 MRPS14O60783 128 aaKnown RBP1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 IFNA16P05015 189 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 IL9P15248 144 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 ZNF80P51504 273 aaPredicted RBP1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 DEFA1P59665 94 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 SNRPD2P62316 118 aaKnown RBP1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 ITGB3BPQ13352 177 aaPredicted RBP1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 KCNJ8Q15842 424 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 SPANXN3Q5MJ09 141 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 SPOPLQ6IQ16 392 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 LPCAT3Q6P1A2 487 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 LCN15Q6UWW0 184 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 C1orf158Q8N1D5 194 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 C15orf53Q8NAA6 179 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 DNAJC9Q8WXX5 260 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 DCUN1D1Q96GG9 259 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 SCGB3A1Q96QR1 104 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 SERPINI1Q99574 410 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 ULBP3Q9BZM4 244 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 C11orf68Q9H3H3 251 aaKnown RBP1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 MED9Q9NWA0 146 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 CKLFQ9UBR5 152 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 TONSLQ96HA7 1378 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 SNAPC4Q5SXM2 1469 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 GLI3P10071 1580 aa1.04□□□□□ -2.24
TRAPPC11-207ENST00000511409 HEATR5BQ9P2D3 2071 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 TRAV14DV4A0A0A6YYC5 116 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 FAAHO00519 579 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 LYPLA2O95372 231 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 CRYZL1O95825 349 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 G6PCP35575 357 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 RPL5P46777 297 aaKnown RBP1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 CEBPGP53567 150 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 CDK10Q15131 360 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 IMPG1Q17R60 797 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 DPPA3Q6W0C5 159 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 CLVS1Q8IUQ0 354 aaPredicted RBP1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 ZNF439Q8NDP4 499 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 RETNLBQ9BQ08 111 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 PARD6GQ9BYG4 376 aaPredicted RBP1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 REG4Q9BYZ8 158 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 PARVGQ9HBI0 331 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 FBXL12Q9NXK8 326 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 VPS29Q9UBQ0 182 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 SMARCA4P51532 1647 aa1.03□□□□□ -2.24
TRAPPC11-207ENST00000511409 KIF13BQ9NQT8 1826 aa1.03□□□□□ -2.25
TRAPPC11-207ENST00000511409 INTS1Q8N201 2190 aaKnown RBP1.03□□□□□ -2.25
TRAPPC11-207ENST00000511409 BRWD1Q9NSI6 2320 aa1.03□□□□□ -2.25
TRAPPC11-207ENST00000511409 TRAV9-1A0A075B6T8 112 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 FUOMA2VDF0 154 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 DPRXA6NFQ7 191 aa1.02□□□□□ -2.25
TRAPPC11-207ENST00000511409 CLDN24A6NM45 220 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms