RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 COL6A6A6NMZ7 2263 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 CLDN14O95500 239 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 CGAP01215 116 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 PLA2G1BP04054 148 aaKnown RBP7.85□□□□□ -1.15
USP53-207ENST00000510852 OR5G3P0C626 314 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 FAM157CP0CG43 387 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 CDC20BQ86Y33 519 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 RFLNBQ8N5W9 214 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 OR2T27Q8NH04 317 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 ARPC1AQ92747 370 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 NABP1Q96AH0 204 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 MALSU1Q96EH3 234 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 SFXN3Q9BWM7 321 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 DLL4Q9NR61 685 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 CFAP46Q8IYW2 2715 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 POLEQ07864 2286 aa7.85□□□□□ -1.15
USP53-207ENST00000510852 ZNF705EA8MWA4 302 aaPredicted RBP7.84□□□□□ -1.15
USP53-207ENST00000510852 TAS2R20P59543 309 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 ZNF85Q03923 595 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 C22orf34Q6ZV56 151 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 SYT8Q8NBV8 401 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 OTOSQ8NHW6 89 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 THAP6Q8TBB0 222 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 HSD17B10Q99714 261 aaKnown RBP7.84□□□□□ -1.15
USP53-207ENST00000510852 DERL1Q9BUN8 251 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 RBKSQ9H477 322 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 ANXA10Q9UJ72 324 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 LOC107984640A0A0U1RRK4 108 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 PTHP01270 115 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 PRB1P04280 392 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 CXCL2P19875 107 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 MPGP29372 298 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 PMAIP1Q13794 54 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 HRCT1Q6UXD1 115 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 TGIF2LYQ8IUE0 185 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 EXOC3-AS1Q8N2X6 119 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 OR5A1Q8NGJ0 315 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 PP6455Q8WZ26 134 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 PBDC1Q9BVG4 233 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 TTTY10Q9BZA0 68 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 LHFPL6Q9Y693 200 aa7.84□□□□□ -1.15
USP53-207ENST00000510852 NBASA2RRP1 2371 aa7.84□□□□□ -1.16
USP53-207ENST00000510852 ZNF670-ZNF695F2Z2N8 137 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 FCN1O00602 326 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 YIF1AO95070 293 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 OR5AL1P0C617 328 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 FAM106CPP0CH98 169 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 OPRM1P35372 400 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 DEFA3P59666 94 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 ENDOGQ14249 297 aaKnown RBP7.83□□□□□ -1.16
USP53-207ENST00000510852 IGFBP7Q16270 282 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 FAM106AQ4KMX7 169 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 FAM27BQ5VT28 67 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 XAF1Q6GPH4 301 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 C1orf158Q8N1D5 194 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 SLC22A24Q8N4F4 322 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 OR5AP2Q8NGF4 316 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 BORCS7Q96B45 105 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 AMELYQ99218 206 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 ZNF629Q9UEG4 869 aaPredicted RBP7.83□□□□□ -1.16
USP53-207ENST00000510852 TMEM14AQ9Y6G1 99 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 FREM1Q5H8C1 2179 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 PRR32B1ATL7 298 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 CCL21O00585 134 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 MYL12BO14950 172 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 GNB3P16520 340 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 IGHV1-2P23083 117 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 GPR183P32249 361 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 APOC4P55056 127 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 BCL2L15Q5TBC7 163 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 ZNF322Q6U7Q0 402 aaPredicted RBP7.83□□□□□ -1.16
USP53-207ENST00000510852 GDPGP1Q6ZNW5 385 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 ZNF627Q7L945 461 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 PAQR4Q8N4S7 273 aaPredicted RBP7.83□□□□□ -1.16
USP53-207ENST00000510852 OR51A4Q8NGJ6 313 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 C19orf24Q9BVV8 132 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 ISG20L2Q9H9L3 353 aaKnown RBP7.83□□□□□ -1.16
USP53-207ENST00000510852 LSM2Q9Y333 95 aaKnown RBP7.83□□□□□ -1.16
USP53-207ENST00000510852 U3KQE9 123 aa7.83□□□□□ -1.16
USP53-207ENST00000510852 ARHGAP21Q5T5U3 1957 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 NDUFB4O95168 129 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 MT-ND4LP03901 98 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 BCL3P20749 454 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 TSPOP30536 169 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 TMBIM6P55061 237 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 RPL24P83731 157 aaKnown RBP7.82□□□□□ -1.16
USP53-207ENST00000510852 ZNF705AQ6ZN79 300 aaPredicted RBP7.82□□□□□ -1.16
USP53-207ENST00000510852 ZCCHC24Q8N2G6 241 aaKnown RBP7.82□□□□□ -1.16
USP53-207ENST00000510852 MMP26Q9NRE1 261 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 PHF3Q92576 2039 aaKnown RBP7.82□□□□□ -1.16
USP53-207ENST00000510852 ADARB2-AS1A8MUL3 147 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 RER1O15258 196 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 BUB3O43684 328 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 LYZL6O75951 148 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 PATE4P0C8F1 98 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 GZMBP10144 247 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 ZNF19P17023 458 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 COX5AP20674 150 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 GNLYP22749 145 aa7.82□□□□□ -1.16
USP53-207ENST00000510852 OR12D2P58182 307 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms