RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 DEFB125Q8N687 156 aa17.27■□□□□ 0.36
SNF8-209ENST00000510558 OR1L6Q8NGR2 347 aa17.27■□□□□ 0.36
SNF8-209ENST00000510558 OR4A16Q8NH70 328 aa17.27■□□□□ 0.36
SNF8-209ENST00000510558 BSCL2Q96G97 398 aaPredicted RBP17.27■□□□□ 0.36
SNF8-209ENST00000510558 C21orf62Q9NYP8 219 aa17.27■□□□□ 0.36
SNF8-209ENST00000510558 UFC1Q9Y3C8 167 aa17.27■□□□□ 0.36
SNF8-209ENST00000510558 CEPT1Q9Y6K0 416 aa17.27■□□□□ 0.36
SNF8-209ENST00000510558 OR11H12B2RN74 326 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 K7EIM0 57 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 RGS5O15539 181 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 C8orf88P0DMB2 117 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 ELLP55199 621 aaPredicted RBP17.26■□□□□ 0.35
SNF8-209ENST00000510558 PIGPP57054 158 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 LINC00322Q6ZN03 302 aaPredicted RBP17.26■□□□□ 0.35
SNF8-209ENST00000510558 OR4D10Q8NGI6 311 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 SCARB1Q8WTV0 552 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 TMEM190Q8WZ59 177 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 ATP6V0BQ99437 205 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 MRPL27Q9P0M9 148 aaKnown RBP17.26■□□□□ 0.35
SNF8-209ENST00000510558 DNAH7Q8WXX0 4024 aa17.26■□□□□ 0.35
SNF8-209ENST00000510558 CD74P04233 296 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 PPP5CP53041 499 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 CASC10Q5T4H9 136 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 SPSB3Q6PJ21 355 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 SLC16A13Q7RTY0 426 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 TMEM229BQ8NBD8 167 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 OR1P1Q8NH06 330 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 SRD5A3Q9H8P0 318 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 EDA2RQ9HAV5 297 aa17.25■□□□□ 0.35
SNF8-209ENST00000510558 F8W735 103 aaPredicted RBP17.24■□□□□ 0.35
SNF8-209ENST00000510558 GABARAPH6UMI1 98 aa17.24■□□□□ 0.35
SNF8-209ENST00000510558 CTDSP2O14595 271 aa17.24■□□□□ 0.35
SNF8-209ENST00000510558 SCAF4O95104 1147 aaKnown RBP17.24■□□□□ 0.35
SNF8-209ENST00000510558 TAS2R19P59542 299 aa17.24■□□□□ 0.35
SNF8-209ENST00000510558 PRCDQ00LT1 54 aa17.24■□□□□ 0.35
SNF8-209ENST00000510558 CLVS1Q8IUQ0 354 aaPredicted RBP17.24■□□□□ 0.35
SNF8-209ENST00000510558 OR2C3Q8N628 320 aa17.24■□□□□ 0.35
SNF8-209ENST00000510558 UBAC2Q8NBM4 344 aa17.24■□□□□ 0.35
SNF8-209ENST00000510558 TP53RKQ96S44 253 aa17.24■□□□□ 0.35
SNF8-209ENST00000510558 CHRDL1Q9BU40 450 aa17.24■□□□□ 0.35
SNF8-209ENST00000510558 RBMY1BA6NDE4 496 aaKnown RBP17.23■□□□□ 0.35
SNF8-209ENST00000510558 RBMY1EA6NEQ0 496 aaKnown RBP17.23■□□□□ 0.35
SNF8-209ENST00000510558 RAB3DO95716 219 aa17.23■□□□□ 0.35
SNF8-209ENST00000510558 RBMY1DP0C7P1 496 aaKnown RBP17.23■□□□□ 0.35
SNF8-209ENST00000510558 LYL1P12980 280 aa17.23■□□□□ 0.35
SNF8-209ENST00000510558 IZUMO4Q1ZYL8 232 aa17.23■□□□□ 0.35
SNF8-209ENST00000510558 Q56UQ5 140 aa17.23■□□□□ 0.35
SNF8-209ENST00000510558 STEAP1BQ6NZ63 245 aa17.23■□□□□ 0.35
SNF8-209ENST00000510558 OR52B4Q8NGK2 314 aa17.23■□□□□ 0.35
SNF8-209ENST00000510558 TERB2Q8NHR7 220 aa17.23■□□□□ 0.35
SNF8-209ENST00000510558 ISOC1Q96CN7 298 aa17.23■□□□□ 0.35
SNF8-209ENST00000510558 TRAV25A0A0B4J276 109 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 C3orf85A0A1B0GTC6 90 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 NDUFA4O00483 81 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 IGKV1-5P01602 117 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 ADMP35318 185 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 HSPE1P61604 102 aaKnown RBP17.22■□□□□ 0.35
SNF8-209ENST00000510558 MRPS10P82664 201 aaKnown RBP17.22■□□□□ 0.35
SNF8-209ENST00000510558 SSBP1Q04837 148 aaKnown RBP17.22■□□□□ 0.35
SNF8-209ENST00000510558 SCGB2B2Q4G0G5 96 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 OR13C8Q8NGS7 320 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 ZFAND1Q8TCF1 268 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 RAB2BQ8WUD1 216 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 MISP3Q96FF7 219 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 HIPK2Q9H2X6 1198 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 RETNQ9HD89 108 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 DAZ1Q9NQZ3 744 aaKnown RBP17.22■□□□□ 0.35
SNF8-209ENST00000510558 COPZ2Q9P299 210 aa17.22■□□□□ 0.35
SNF8-209ENST00000510558 AKR1C2P52895 323 aa17.21■□□□□ 0.35
SNF8-209ENST00000510558 ANKRD55Q3KP44 614 aa17.21■□□□□ 0.35
SNF8-209ENST00000510558 RBPMS2Q6ZRY4 209 aaKnown RBP17.21■□□□□ 0.35
SNF8-209ENST00000510558 CCDC71LQ8N9Z2 235 aa17.21■□□□□ 0.35
SNF8-209ENST00000510558 ZNF114Q8NC26 417 aa17.21■□□□□ 0.35
SNF8-209ENST00000510558 P0C879 139 aa17.2■□□□□ 0.34
SNF8-209ENST00000510558 MARCH1Q8TCQ1 289 aa17.2■□□□□ 0.34
SNF8-209ENST00000510558 DYNC2LI1Q8TCX1 351 aa17.2■□□□□ 0.34
SNF8-209ENST00000510558 SMIM4Q8WVI0 70 aa17.2■□□□□ 0.34
SNF8-209ENST00000510558 C20orf24Q9BUV8 137 aa17.2■□□□□ 0.34
SNF8-209ENST00000510558 C5orf66Q9H5L9 145 aa17.2■□□□□ 0.34
SNF8-209ENST00000510558 GAR1Q9NY12 217 aaKnown RBP17.2■□□□□ 0.34
SNF8-209ENST00000510558 CCDC59Q9P031 241 aaKnown RBP17.2■□□□□ 0.34
SNF8-209ENST00000510558 RYR3Q15413 4870 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 IGHV3OR16-8A0A075B7F1 116 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 I3L2K1 104 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 ATG12O94817 140 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 TMBIM6P55061 237 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 ERHP84090 104 aaKnown RBP17.19■□□□□ 0.34
SNF8-209ENST00000510558 TRIM16LQ309B1 348 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 SP6Q3SY56 376 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 SPINK9Q5DT21 86 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 FAAP20Q6NZ36 180 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 BCL7BQ9BQE9 202 aa17.19■□□□□ 0.34
SNF8-209ENST00000510558 MT-CO2P00403 227 aa17.18■□□□□ 0.34
SNF8-209ENST00000510558 CTSDP07339 412 aaPredicted RBP17.18■□□□□ 0.34
SNF8-209ENST00000510558 CTSGP08311 255 aa17.18■□□□□ 0.34
SNF8-209ENST00000510558 MFAP4P55083 255 aa17.18■□□□□ 0.34
SNF8-209ENST00000510558 MEF2DQ14814 521 aa17.18■□□□□ 0.34
SNF8-209ENST00000510558 DIRAS2Q96HU8 199 aa17.18■□□□□ 0.34
SNF8-209ENST00000510558 A0A0B4J293 547 aa17.17■□□□□ 0.34
SNF8-209ENST00000510558 K7EMT4 169 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms