RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 WDR86Q86TI4 376 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 PDPNQ86YL7 162 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 BEND2Q8NDZ0 799 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 COQ2Q96H96 371 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 PAXXQ9BUH6 204 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 YTHDF2Q9Y5A9 579 aaKnown RBP12.38□□□□□ -0.43
USP38-202ENST00000510377 DUTP33316 252 aaKnown RBP12.38□□□□□ -0.43
USP38-202ENST00000510377 C10orf113Q5VZT2 155 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 HCP5Q6MZN7 132 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 MGST2Q99735 147 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 WASHC3Q9Y3C0 194 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 MT-ND6P03923 174 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 CDKN1AP38936 164 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 ZNF146Q15072 292 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 ASPHD1Q5U4P2 390 aa12.38□□□□□ -0.43
USP38-202ENST00000510377 YLPM1P49750 1951 aaKnown RBP12.38□□□□□ -0.43
USP38-202ENST00000510377 HLA-DQA1P01909 254 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 TMEM11P17152 192 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 LHFPL4Q7Z7J7 247 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 C11orf1Q9H5F2 150 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 TNCP24821 2201 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 TRBV6-6A0A0A6YYG2 114 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 C9orf172C9J069 976 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 SSBP4Q9BWG4 385 aaPredicted RBP12.37□□□□□ -0.43
USP38-202ENST00000510377 A0A1W2PRD5 423 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 A0A1W2PRF3 423 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 A0A1W2PRM7 423 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 NTN3O00634 580 aaPredicted RBP12.37□□□□□ -0.43
USP38-202ENST00000510377 PRRG2O14669 202 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 OR2T6Q8NHC8 308 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 ADTRPQ96IZ2 230 aa12.37□□□□□ -0.43
USP38-202ENST00000510377 AMMECR1Q9Y4X0 333 aaPredicted RBP12.37□□□□□ -0.43
USP38-202ENST00000510377 IGF2RP11717 2491 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 TRAV17A0A0B4J275 112 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 RBP4P02753 201 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 HTR1DP28221 377 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 RNF2Q99496 336 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 NUPR1O60356 82 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 STAG3L2P0CL84 134 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 STAG3L3P0CL85 134 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 C8orf88P0DMB2 117 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 JPT1Q9UK76 154 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 AMY1AP04745 511 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 LYZP61626 148 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 LCN12Q6JVE5 192 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 RNASEH2CQ8TDP1 164 aaKnown RBP12.36□□□□□ -0.43
USP38-202ENST00000510377 RNF7Q9UBF6 113 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 PTPRQQ9UMZ3 2332 aa12.36□□□□□ -0.43
USP38-202ENST00000510377 PRUNE2Q8WUY3 3088 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 hADV38S2A0JD32 116 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 IQCF6A8MYZ5 107 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 CD99P14209 185 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 SSX8Q7RTT4 187 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 MOB3BQ86TA1 216 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 OR9G1Q8NH87 305 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 NPIPB3Q92617 1050 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 CHRDL1Q9BU40 450 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 FOXL1Q12952 345 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 MORN2Q502X0 79 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 OR8B2Q96RD0 313 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 TMEM208Q9BTX3 173 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 SPRR3Q9UBC9 169 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 PGPA6NDG6 321 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 Q6ZSR3 168 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 OR1L4Q8NGR5 311 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 CEP295Q9C0D2 2601 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 P01737 135 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 NPPCP23582 126 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 TNXAQ16473 311 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 COX19Q49B96 90 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 OR1L8Q8NGR8 309 aa12.35□□□□□ -0.43
USP38-202ENST00000510377 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.34□□□□□ -0.43
USP38-202ENST00000510377 TDGF1P3P51864 188 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 HES1Q14469 280 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 MLANAQ16655 118 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 PGLYRP4Q96LB8 373 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 YPEL4Q96NS1 127 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 MRPS18CQ9Y3D5 142 aaKnown RBP12.34□□□□□ -0.43
USP38-202ENST00000510377 ARFGEF3Q5TH69 2177 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 TRAV5A0A0B4J249 113 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 MLNRO43193 412 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 COL8A1P27658 744 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 Q6ZT83 130 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 SPG11Q96JI7 2443 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 TNFSF13O75888 250 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 FAM216BQ8N7L0 139 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 SAP30LQ9HAJ7 183 aa12.34□□□□□ -0.43
USP38-202ENST00000510377 MBNL3Q9NUK0 354 aaKnown RBP12.34□□□□□ -0.43
USP38-202ENST00000510377 TMSB15BA0A087X1C1 80 aa12.33□□□□□ -0.44
USP38-202ENST00000510377 F2Z2F3 143 aa12.33□□□□□ -0.44
USP38-202ENST00000510377 DLEU1O43261 78 aa12.33□□□□□ -0.44
USP38-202ENST00000510377 MOSP00540 346 aa12.33□□□□□ -0.44
USP38-202ENST00000510377 PYYP10082 97 aa12.33□□□□□ -0.44
USP38-202ENST00000510377 VMA21Q3ZAQ7 101 aa12.33□□□□□ -0.44
USP38-202ENST00000510377 PEAR1Q5VY43 1037 aaPredicted RBP12.33□□□□□ -0.44
USP38-202ENST00000510377 SPTBN4Q9H254 2564 aa12.33□□□□□ -0.44
USP38-202ENST00000510377 TDRG1Q3Y452 100 aa12.33□□□□□ -0.44
USP38-202ENST00000510377 FA2HQ7L5A8 372 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms