RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 MRPL27Q9P0M9 148 aaKnown RBP7.54□□□□□ -1.2
PDGFRA-208ENST00000509490 HELTA6NFD8 242 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 SERF1AO75920 110 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 HLA-DQA1P01909 254 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 RNASE2P10153 161 aaKnown RBP7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CBLN1P23435 193 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 GNG4P50150 75 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 KLF3P57682 345 aaPredicted RBP7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CD69Q07108 199 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 TMEM183BQ1AE95 376 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CENPWQ5EE01 88 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 DHRS13Q6UX07 377 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 VKORC1L1Q8N0U8 176 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 OR4P4Q8NGL7 312 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 SSMEM1Q8WWF3 244 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 TBX15Q96SF7 602 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 RNF7Q9UBF6 113 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CDC42EP3Q9UKI2 254 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 TEX50A0A1B0GTY4 177 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 FOXH1O75593 365 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 GPX1P07203 203 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 C8orf88P0DMB2 117 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CT45A6P0DMU7 189 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CT45A5P0DMU8 189 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CT45A7P0DMV0 189 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CTRLP40313 264 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 MEF2CQ06413 473 aaPredicted RBP7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 TMEM177Q53S58 311 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 ATP1A1-AS1Q5TC04 95 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 OR5AU1Q8NGC0 362 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 FAM167A-AS1Q96KT0 104 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 SLC25A33Q9BSK2 321 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 LRFN3Q9BTN0 628 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 SPEGQ15772 3267 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 WDFY3Q8IZQ1 3526 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 IGKV1OR2-108A0A075B7D4 117 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 J3QR06 171 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 AMY1AP04745 511 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 LPAL2Q16609 132 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 IGFL3Q6UXB1 125 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 TMPRSS7Q7RTY8 843 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 LINC00311Q8N616 119 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 THAP8Q8NA92 274 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 NUP37Q8NFH4 326 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 FDCSPQ8NFU4 85 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 OR4B1Q8NGF8 309 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 NDUFA4L2Q9NRX3 87 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 LINC00312Q9Y6C7 94 aa7.53□□□□□ -1.2
PDGFRA-208ENST00000509490 CNTRLQ7Z7A1 2325 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 GGTLC3B5MD39 225 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 BRS3P32247 399 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 KLF5Q13887 457 aaPredicted RBP7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 DMRTA1Q5VZB9 504 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNRF1Q8ND25 227 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 OR5AN1Q8NGI8 311 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 AURKAIP1Q9NWT8 199 aaPredicted RBP7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 DOCK11Q5JSL3 2073 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 IZUMO1RA6ND01 250 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 FCN1O00602 326 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 FSTL3O95633 263 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 ZNF137PP52743 207 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 TIGITQ495A1 244 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 MOGAT3Q86VF5 341 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 LRP11Q86VZ4 500 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 ST6GALNAC3Q8NDV1 305 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 OR5T1Q8NG75 326 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 KCNS1Q96KK3 526 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 ASCL3Q9NQ33 180 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 PPP1R14DQ9NXH3 145 aa7.52□□□□□ -1.21
PDGFRA-208ENST00000509490 MYO15AQ9UKN7 3530 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 A0A1B0GUS0 222 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 DLL1O00548 723 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 MYCNOSP40205 109 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 PSG5Q15238 335 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 CYB5R2Q6BCY4 276 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 TMEM167AQ8TBQ9 72 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 CHRDL1Q9BU40 450 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 GNB4Q9HAV0 340 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 GCM1Q9NP62 436 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 FZR1Q9UM11 496 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 SNURFLB1AK76 121 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 M0R296 226 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 SLC17A3O00476 420 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 OR2J3O76001 311 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 SFTPCP11686 197 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 BMP5P22003 454 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 SPRNQ5BIV9 151 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 UTF1Q5T230 341 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 C19orf35Q6ZS72 473 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 ITLN1Q8WWA0 313 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 HSPB9Q9BQS6 159 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 SLC35D1Q9NTN3 355 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 SH3BGRL2Q9UJC5 107 aa7.51□□□□□ -1.21
PDGFRA-208ENST00000509490 A0A1W2PN81 502 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 CRYBB3P26998 211 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 USF2Q15853 346 aaPredicted RBP7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 LTC4SQ16873 150 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 SLC25A2Q9BXI2 301 aa7.5□□□□□ -1.21
PDGFRA-208ENST00000509490 C7orf69Q9H7B7 122 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms