RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 RPLP1P05386 114 aaKnown RBP11.59□□□□□ -0.55
RNF4-213ENST00000509388 HIST1H1BP16401 226 aaKnown RBP11.59□□□□□ -0.55
RNF4-213ENST00000509388 KRTAP10-3P60369 221 aa11.59□□□□□ -0.55
RNF4-213ENST00000509388 SRSF4Q08170 494 aaKnown RBP11.59□□□□□ -0.55
RNF4-213ENST00000509388 PDLIM3Q53GG5 364 aaPredicted RBP11.59□□□□□ -0.55
RNF4-213ENST00000509388 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
RNF4-213ENST00000509388 OR2C3Q8N628 320 aa11.59□□□□□ -0.55
RNF4-213ENST00000509388 ZBTB8BQ8NAP8 495 aaPredicted RBP11.59□□□□□ -0.55
RNF4-213ENST00000509388 DTD1Q8TEA8 209 aa11.59□□□□□ -0.55
RNF4-213ENST00000509388 C2orf50Q96LR7 162 aa11.59□□□□□ -0.55
RNF4-213ENST00000509388 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
RNF4-213ENST00000509388 MED28Q9H204 178 aa11.59□□□□□ -0.55
RNF4-213ENST00000509388 KLK15Q9H2R5 256 aa11.59□□□□□ -0.55
RNF4-213ENST00000509388 RBKSQ9H477 322 aa11.59□□□□□ -0.55
RNF4-213ENST00000509388 TSSC4Q9Y5U2 329 aaPredicted RBP11.59□□□□□ -0.55
RNF4-213ENST00000509388 A0A0G2JLM5 398 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 NUDT19A8MXV4 375 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 BRI3O95415 125 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 CD83Q01151 205 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 LCNL1Q6ZST4 164 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 CITED1Q99966 193 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 MAGT1Q9H0U3 335 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 MGAT4CQ9UBM8 478 aa11.58□□□□□ -0.56
RNF4-213ENST00000509388 A0A1W2PRX2 142 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 SYNGR2O43760 224 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 OR2J3O76001 311 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 SIX6O95475 246 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 LY86O95711 162 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 IFNA10P01566 189 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 HTR2BP41595 481 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 RPP30P78346 268 aaKnown RBP11.57□□□□□ -0.56
RNF4-213ENST00000509388 RHOGP84095 191 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 CYCSP99999 105 aaKnown RBP11.57□□□□□ -0.56
RNF4-213ENST00000509388 ATP5G2Q06055 141 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 NSUN5P1Q3KNT7 163 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 TCTEX1D4Q5JR98 221 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 C19orf35Q6ZS72 473 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 NOXA1Q86UR1 476 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 RNF152Q8N8N0 203 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 NECAP1Q8NC96 275 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 OR4D5Q8NGN0 318 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 OR1P1Q8NH06 330 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 USMG5Q96IX5 58 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 UBE2E2Q96LR5 201 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 CIB3Q96Q77 187 aaPredicted RBP11.57□□□□□ -0.56
RNF4-213ENST00000509388 FBXL7Q9UJT9 491 aa11.57□□□□□ -0.56
RNF4-213ENST00000509388 F11RQ9Y624 299 aaKnown RBP11.57□□□□□ -0.56
RNF4-213ENST00000509388 PLXNB1O43157 2135 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 FBN1P35555 2871 aaKnown RBP11.56□□□□□ -0.56
RNF4-213ENST00000509388 FAM223BA6NKX1 122 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 IAPPP10997 89 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 CDX1P47902 265 aaPredicted RBP11.56□□□□□ -0.56
RNF4-213ENST00000509388 POLR2GP62487 172 aaKnown RBP eCLIP11.56□□□□□ -0.56
RNF4-213ENST00000509388 RPL23AP62750 156 aaKnown RBP11.56□□□□□ -0.56
RNF4-213ENST00000509388 ID3Q02535 119 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 C2orf68Q2NKX9 166 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 HIST2H2BDQ6DRA6 164 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 NDUFA11Q86Y39 141 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 FAM223AQ8IWN6 122 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 P2RX4Q99571 388 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 PAIP2BQ9ULR5 123 aaKnown RBP11.56□□□□□ -0.56
RNF4-213ENST00000509388 U3KQ87 197 aa11.56□□□□□ -0.56
RNF4-213ENST00000509388 TNCP24821 2201 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 IGLV11-55A0A075B6I3 123 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 L7N2F9 121 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 S100A10P60903 97 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 VAMP2P63027 116 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 ZNF491Q8N8L2 437 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 ZNF114Q8NC26 417 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 KLHL30-AS1Q8NEE0 82 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 SLC24A4Q8NFF2 622 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 SPATA3Q8NHX4 192 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 MISP3Q96FF7 219 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 OR5B12Q96R08 314 aa11.55□□□□□ -0.56
RNF4-213ENST00000509388 LSM5Q9Y4Y9 91 aaKnown RBP11.55□□□□□ -0.56
RNF4-213ENST00000509388 TRBV9A0A0B4J1U6 114 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 CORTO00230 105 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 SSSCA1O60232 199 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 NDUFB8O95169 186 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 IGHV3-11P01762 117 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 PVALBP20472 110 aaPredicted RBP11.54□□□□□ -0.56
RNF4-213ENST00000509388 NPY1RP25929 384 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 ATP5IP56385 69 aaPredicted RBP11.54□□□□□ -0.56
RNF4-213ENST00000509388 DEFA5Q01523 94 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 C15orf32Q32M92 178 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 EEF1AKMT3Q96AZ1 226 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 PINX1Q96BK5 328 aaKnown RBP11.54□□□□□ -0.56
RNF4-213ENST00000509388 CXorf58Q96LI9 332 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 RAB40CQ96S21 281 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 NMES1Q9C002 83 aa11.54□□□□□ -0.56
RNF4-213ENST00000509388 M0QZ24 198 aa11.53□□□□□ -0.56
RNF4-213ENST00000509388 MBPP02686 304 aaPredicted RBP11.53□□□□□ -0.56
RNF4-213ENST00000509388 RLN2P04090 185 aa11.53□□□□□ -0.56
RNF4-213ENST00000509388 RNASE2P10153 161 aaKnown RBP11.53□□□□□ -0.56
RNF4-213ENST00000509388 RRAS2P62070 204 aaPredicted RBP11.53□□□□□ -0.56
RNF4-213ENST00000509388 RAB11AP62491 216 aa11.53□□□□□ -0.56
RNF4-213ENST00000509388 KIAA0141Q14154 515 aaPredicted RBP11.53□□□□□ -0.56
RNF4-213ENST00000509388 FCN2Q15485 313 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms