RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TGOLN2O43493 480 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 TPPPO94811 219 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 SCAF4O95104 1147 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 PIGPP57054 158 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 HAGHQ16775 308 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 HSD17B13Q7Z5P4 300 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 OR5B3Q8NH48 314 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 TMEM56Q96MV1 263 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 TP53RKQ96S44 253 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 TSC22D3Q99576 134 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 RETNQ9HD89 108 aa11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 TECRQ9NZ01 308 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-228ENST00000508974 IGHV3OR16-8A0A075B7F1 116 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 A8MWP6 167 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 RAB3DO95716 219 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 Q56UQ5 140 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 ZNF57Q68EA5 555 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 LHFPL1Q86WI0 220 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 ARRDC1Q8N5I2 433 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 MUC7Q8TAX7 377 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 MARCH1Q8TCQ1 289 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 SCARB1Q8WTV0 552 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 MISP3Q96FF7 219 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 FKBP11Q9NYL4 201 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 C21orf62Q9NYP8 219 aa11.15□□□□□ -0.62
UBE2D3-228ENST00000508974 OR11H12B2RN74 326 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 ZNF207O43670 478 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 IGHV3-48P01763 117 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 AKR1C2P52895 323 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 TAS2R19P59542 299 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 IL18Q14116 193 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 SP6Q3SY56 376 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 STEAP1BQ6NZ63 245 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 TMEM229BQ8NBD8 167 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 OR13C8Q8NGS7 320 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 CHRDL1Q9BU40 450 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 SRD5A3Q9H8P0 318 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 PALMDQ9NP74 551 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 FAM212BQ9NTI7 297 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 CEPT1Q9Y6K0 416 aa11.14□□□□□ -0.63
UBE2D3-228ENST00000508974 C3orf85A0A1B0GTC6 90 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 GABARAPH6UMI1 98 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 K7EIM0 57 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 IGKV1-5P01602 117 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 TBPP20226 339 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 RND3P61587 244 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 TRIM16LQ309B1 348 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 CADM3Q8N126 398 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 OR52B4Q8NGK2 314 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 DYNC2LI1Q8TCX1 351 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 RAB2BQ8WUD1 216 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 C15orf40Q8WUR7 153 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 PINX1Q96BK5 328 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 BSCL2Q96G97 398 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 ZNF486Q96H40 463 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 DIRAS2Q96HU8 199 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 FAM110AQ9BQ89 295 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 C20orf24Q9BUV8 137 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 ZNF436Q9C0F3 470 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 C6orf62Q9GZU0 229 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 COPZ2Q9P299 210 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 UFC1Q9Y3C8 167 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 DNAH7Q8WXX0 4024 aa11.13□□□□□ -0.63
UBE2D3-228ENST00000508974 F8W735 103 aaPredicted RBP11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 C3orf84H3BNL1 204 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 NOL3O60936 208 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 CD74P04233 296 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 SLC16A13Q7RTY0 426 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 CCDC71LQ8N9Z2 235 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 TERB2Q8NHR7 220 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 RNASE11Q8TAA1 199 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 ZFAND1Q8TCF1 268 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 TMEM190Q8WZ59 177 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 ZFAND3Q9H8U3 227 aa11.12□□□□□ -0.63
UBE2D3-228ENST00000508974 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 ADMP35318 185 aa11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 TMBIM6P55061 237 aa11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 HSPE1P61604 102 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 ZFAND6Q6FIF0 208 aa11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 OR2C3Q8N628 320 aa11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 OR1L6Q8NGR2 347 aa11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 OR1P1Q8NH06 330 aa11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 SMIM4Q8WVI0 70 aa11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 CITED4Q96RK1 184 aa11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 CCDC59Q9P031 241 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 MRPL27Q9P0M9 148 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-228ENST00000508974 H3BMQ9 156 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 ST8SIA3O43173 380 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 MT-CO2P00403 227 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 IFNA17P01571 189 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 LYL1P12980 280 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 CASC10Q5T4H9 136 aa11.1□□□□□ -0.63
UBE2D3-228ENST00000508974 SPSB3Q6PJ21 355 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms