RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 OR2T8A6NH00 312 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 IGHV2-5P01817 119 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 CYCSP99999 105 aaKnown RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 CDK6Q00534 326 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 FAM53BQ14153 422 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF57Q68EA5 555 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF880Q6PDB4 577 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SLC25A38Q96DW6 304 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 OR2A5Q96R48 311 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF436Q9C0F3 470 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 JPT2Q9H910 190 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 MAP6D1Q9H9H5 199 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 A0A0A6YYD4 124 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 LGALS9O00182 355 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 GNGT2O14610 69 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 C1QL1O75973 258 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SLC25A4P12235 298 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 HIST1H1BP16401 226 aaKnown RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 TIMP3P35625 211 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 CEACAM16Q2WEN9 425 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 C6orf99Q4VX62 202 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 TMEM244Q5VVB8 128 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 OR8D4Q8NGM9 314 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 HIST1H2BAQ96A08 127 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 C1QTNF6Q9BXI9 259 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00470Q9BZP3 86 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 NKX6-2Q9C056 277 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 GNG13Q9P2W3 67 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 RPUSD1Q9UJJ7 312 aaKnown RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 PIPP12273 146 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 CRHBPP24387 322 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 FAUP35544 74 aaKnown RBP3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SLURP1P55000 103 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 CDK5Q00535 292 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00336Q6ZUF6 198 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00173Q6ZV60 143 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 OR5D14Q8NGL3 314 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 OR10AG1Q8NH19 301 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 FXYD5Q96DB9 178 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 SH3BGRL3Q9H299 93 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 AK3Q9UIJ7 227 aa3.2□□□□□ -1.9
NEDD4-209ENST00000508871 K7N7A8 449 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 HMGN4O00479 90 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 C1QCP02747 245 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 TRIP6Q15654 476 aaKnown RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 MPV17L2Q567V2 206 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 SAXO1Q8IYX7 474 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 CLECL1Q8IZS7 167 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 PRAP1Q96NZ9 151 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 AICDAQ9GZX7 198 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 TMEM56-RWDD3S4R434 201 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 A0A1W2PRE2 83 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 NDUFB3O43676 98 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 PLA2G1BP04054 148 aaKnown RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 OR5AC1P0C628 307 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 BCL2P10415 239 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 OR1D5P58170 312 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 ZFP36L1Q07352 338 aaKnown RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 OR10G6Q8NH81 332 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00477Q96M19 166 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 PRELID3AQ96N28 172 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 PRSS27Q9BQR3 290 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 PRADC1Q9BSG0 188 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 FUT9Q9Y231 359 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 TP53TG1Q9Y2A0 90 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 A0A1W2PPI3 338 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 A6NDX4 124 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 ETV2O00321 342 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 PMS2P2O95744 297 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 CELA2AP08217 269 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 CT62P0C5K7 136 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF883P0CG24 379 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 LMO1P25800 156 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF93P35789 620 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 TAS2R20P59543 309 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 YPEL3P61236 119 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 CATR1Q13166 79 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 CIRBPQ14011 172 aaKnown RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 SFXN4Q6P4A7 337 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 VN1R4Q7Z5H5 301 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 Q8N9W7 124 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 OR11G2Q8NGC1 345 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 OR5H2Q8NGV7 314 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 OR4S2Q8NH73 311 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 GNB1LQ9BYB4 327 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 VSIRQ9H7M9 311 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 LOC100130705A0A1B0GUX0 176 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 CBR1P16152 277 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 CKS2P33552 79 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 RPL23P62829 140 aaKnown RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 IBA57Q5T440 356 aaKnown RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 LCE2DQ5TA82 110 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-209ENST00000508871 PRSS57Q6UWY2 283 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 AMTNQ6UX39 209 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 ZNF788Q6ZQV5 615 aa3.19□□□□□ -1.9
NEDD4-209ENST00000508871 LINC00299Q6ZSB3 139 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms