RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 TVP23BQ9NYZ1 205 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 TIMM22Q9Y584 194 aa2.09□□□□□ -2.07
TRAPPC13-209ENST00000508304 J3QRK9 145 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 PGRMC1O00264 195 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 IGHV3-7P01780 117 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 C1QAP02745 245 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 PPBPP02775 128 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 MSMBP08118 114 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 SMIM10L2AP0DMW4 78 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 SMIM10L2BP0DMW5 78 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 CBR1P16152 277 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 RPL28P46779 137 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 TCTAP57738 103 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 TAS2R41P59536 307 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 RAB14P61106 215 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 TMEM258P61165 79 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 RHOBP62745 196 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 RHEBQ15382 184 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 MOGQ16653 247 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 IBA57Q5T440 356 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 LYZL1Q6UWQ5 148 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 BPIFA4PQ86YQ2 179 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 OR11H6Q8NGC7 330 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 OR4X2Q8NGF9 303 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 GPR146Q96CH1 333 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 ZHX1-C8orf76Q96EF9 292 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 HOPXQ9BPY8 73 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 DERL1Q9BUN8 251 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 PBDC1Q9BVG4 233 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 MRPL40Q9NQ50 206 aaKnown RBP2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 NDUFB11Q9NX14 153 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 HHLA3Q9XRX5 114 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 CAMSAP1Q5T5Y3 1602 aa2.08□□□□□ -2.08
TRAPPC13-209ENST00000508304 TRAPPC13A5PLN9 417 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 ZNF73O43830 326 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 NDUFC2O95298 119 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 ZNF682O95780 498 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 RPS4Y1P22090 263 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 NFYAP23511 347 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 HSPE1P61604 102 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 TAF9Q16594 264 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 AKR1C8PQ5T2L2 129 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 C3orf33Q6P1S2 294 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 SMIM15Q7Z3B0 74 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 LYG2Q86SG7 212 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 TRAPPC6BQ86SZ2 158 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 H1FXQ92522 213 aaKnown RBP2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 SLC7A6Q92536 515 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 SCGB3A1Q96QR1 104 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 C20orf27Q9GZN8 174 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 CYSLTR1Q9Y271 337 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 ROCK1Q13464 1354 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 ROBO3Q96MS0 1386 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 DOCK5Q9H7D0 1870 aa2.07□□□□□ -2.08
TRAPPC13-209ENST00000508304 NACADO15069 1562 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 HECW2Q9P2P5 1572 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 TRAV41A0A0B4J266 112 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 A0A1B0GV72 72 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 SDHAF1A6NFY7 115 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 RFPL4AA6NLU0 287 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 C1orf196B1AJZ1 125 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 CLDN25C9JDP6 229 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 RFPL4AL1F8VTS6 287 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 H7C2G1 150 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 BANF1O75531 89 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 IFNA7P01567 189 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 LGALS1P09382 135 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 OR4E1P0C645 316 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 GABRA4P48169 554 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 B2MP61769 119 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 GNG3P63215 75 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 ZNF90Q03938 601 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 TSNQ15631 228 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 CLVS1Q8IUQ0 354 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 STX19Q8N4C7 294 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 GPER1Q99527 375 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 TMEM70Q9BUB7 260 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 BIN3Q9NQY0 253 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 SSR3Q9UNL2 185 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 RBM7Q9Y580 266 aaKnown RBP2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 FAM215AQ9Y5M1 114 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 SDK2Q58EX2 2172 aa2.06□□□□□ -2.08
TRAPPC13-209ENST00000508304 PLXNB1O43157 2135 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 ZNF407Q9C0G0 2248 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 ODF3BA8MYP8 253 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 AIPO00170 330 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 CYB5BO43169 146 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 CST8O60676 142 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 PFDN1O60925 122 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 CIAO1O76071 339 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 IGKV1-5P01602 117 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 IFI30P13284 250 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 SERPINB1P30740 379 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 PHBP35232 272 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 NCALDP61601 193 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 NDUFA5Q16718 116 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 Q6Q795 121 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 DPPA3Q6W0C5 159 aa2.05□□□□□ -2.08
TRAPPC13-209ENST00000508304 SMIM20Q8N5G0 67 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms