RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 GCM1Q9NP62 436 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 ENY2Q9NPA8 101 aa11□□□□□ -0.65
SNCAIP-209ENST00000508017 INTS1Q8N201 2190 aaKnown RBP11□□□□□ -0.65
SNCAIP-209ENST00000508017 SRRM5B3KS81 715 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 RAB7AP51149 207 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 OR10J3Q5JRS4 329 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 DMRTA1Q5VZB9 504 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 NIT1Q86X76 327 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 UBALD2Q8IYN6 164 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 GCSAMQ8N6F7 178 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 WNT10AQ9GZT5 417 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 OSTCQ9NRP0 149 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 SLC25A10Q9UBX3 287 aaPredicted RBP10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 CDC42EP3Q9UKI2 254 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 MT-ND6P03923 174 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 C3orf79P0CE67 100 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 KIR2DS2P43631 304 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 SUMO1P63165 101 aaKnown RBP10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 TIGITQ495A1 244 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 COL5A1-AS1Q5SY13 56 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 FAM201AQ5SY85 155 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 WDR73Q6P4I2 378 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 STARD4Q96DR4 205 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 SERTAD4Q9NUC0 356 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 OR51B2Q9Y5P1 312 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 ICE1Q9Y2F5 2266 aa10.99□□□□□ -0.65
SNCAIP-209ENST00000508017 IGHV2OR16-5A0A0B4J2B6 119 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 AMY1AP04745 511 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 LINC00614P0C842 121 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 KIR2DL2P43627 348 aaPredicted RBP10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 C17orf58Q2M2W7 97 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 CR1LQ2VPA4 569 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 TMEM164Q5U3C3 297 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 DUX4L9Q6RFH8 374 aaPredicted RBP10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 ATOH7Q8N100 152 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 STPG4Q8N801 248 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 FAM168AQ92567 244 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 DCAF16Q9NXF7 216 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 YLPM1P49750 1951 aaKnown RBP10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 IGHV1-18A0A0C4DH31 117 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 HYPMO75409 117 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 ZNF324O75467 553 aaPredicted RBP10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 SFTPCP11686 197 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 CHRNB4P30926 498 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 MAJINQ3KP22 176 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 IBA57Q5T440 356 aaKnown RBP10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 ALKBH2Q6NS38 261 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 C11orf42Q8N5U0 333 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 IGF2BP2-AS1Q96M15 143 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 LINC00479Q96M42 142 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 PLEKHA3Q9HB20 300 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 PPP1R14DQ9NXH3 145 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 TECRQ9NZ01 308 aaKnown RBP10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 TANC2Q9HCD6 1990 aa10.98□□□□□ -0.65
SNCAIP-209ENST00000508017 BOD1L1Q8NFC6 3051 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 TRAV34A0A0B4J273 112 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 SMIM27A0A1W2PRY6 76 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 ISLRO14498 428 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 OR5G3P0C626 314 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 IGLC2P0DOY2 106 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 IGLC3P0DOY3 106 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 NTF3P20783 257 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 RELQ04864 619 aaPredicted RBP10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 SLAQ13239 276 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 GUSBP1Q15486 140 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 MORN5Q5VZ52 161 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 LYG1Q8N1E2 194 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 C9orf106Q8NAJ2 232 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 OR9G1Q8NH87 305 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 TSKUQ8WUA8 353 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 FER1L6-AS2Q96M78 137 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 SSBP3Q9BWW4 388 aaPredicted RBP10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 ARFGEF3Q5TH69 2177 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 SMG1Q96Q15 3661 aaKnown RBP10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 J3QR06 171 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 NDUFB8O95169 186 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 GNG10P50151 68 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 MBNL2Q5VZF2 373 aaKnown RBP10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 LCN12Q6JVE5 192 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 MOGAT3Q86VF5 341 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 SLC35E1Q96K37 410 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 ZNRD1Q9P1U0 126 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 ARL2-SNX15V9GYD0 113 aa10.97□□□□□ -0.65
SNCAIP-209ENST00000508017 SVILO95425 2214 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 TRAV5A0A0B4J249 113 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 SIAH2O43255 324 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 CRYABP02511 175 aaKnown RBP10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 CGB3P0DN86 165 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 CGB7P0DN87 165 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 Q6ZN92 141 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 UQCR10Q9UDW1 63 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 ZFP30Q9Y2G7 519 aa10.96□□□□□ -0.65
SNCAIP-209ENST00000508017 CACNA1GO43497 2377 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 DPRXA6NFQ7 191 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 TCF21O43680 179 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 APCSP02743 223 aa10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 USF1P22415 310 aaPredicted RBP10.96□□□□□ -0.66
SNCAIP-209ENST00000508017 PPOXP50336 477 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms