RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 TSPAN5P62079 268 aa12.02□□□□□ -0.49
HOXC4-203ENST00000507650 GPR107Q5VW38 600 aa12.02□□□□□ -0.49
HOXC4-203ENST00000507650 SLC25A24Q6NUK1 477 aa12.02□□□□□ -0.49
HOXC4-203ENST00000507650 ISOC1Q96CN7 298 aa12.02□□□□□ -0.49
HOXC4-203ENST00000507650 FAM212BQ9NTI7 297 aaPredicted RBP12.02□□□□□ -0.49
HOXC4-203ENST00000507650 IGKV1-5P01602 117 aa12.01□□□□□ -0.49
HOXC4-203ENST00000507650 CD3DP04234 171 aa12.01□□□□□ -0.49
HOXC4-203ENST00000507650 ALDH3B2P48448 385 aa12.01□□□□□ -0.49
HOXC4-203ENST00000507650 PLET1Q6UQ28 207 aa12.01□□□□□ -0.49
HOXC4-203ENST00000507650 HSD17B13Q7Z5P4 300 aaPredicted RBP12.01□□□□□ -0.49
HOXC4-203ENST00000507650 OR5B3Q8NH48 314 aa12.01□□□□□ -0.49
HOXC4-203ENST00000507650 TP53RKQ96S44 253 aa12.01□□□□□ -0.49
HOXC4-203ENST00000507650 EXTL2Q9UBQ6 330 aa12.01□□□□□ -0.49
HOXC4-203ENST00000507650 PRNDQ9UKY0 176 aa12.01□□□□□ -0.49
HOXC4-203ENST00000507650 SMIM31A0A1B0GVY4 71 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 FAM25AB3EWG3 89 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 FAM25CB3EWG5 89 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 FAM25GB3EWG6 89 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 I3L2K1 104 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 ZNF182P17025 639 aaPredicted RBP12□□□□□ -0.49
HOXC4-203ENST00000507650 ELLP55199 621 aaPredicted RBP12□□□□□ -0.49
HOXC4-203ENST00000507650 RND3P61587 244 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 SPCS2Q15005 226 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 SLC38A6Q8IZM9 456 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 OR2C3Q8N628 320 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 C21orf62Q9NYP8 219 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 THYN1Q9P016 225 aa12□□□□□ -0.49
HOXC4-203ENST00000507650 ALMS1Q8TCU4 4167 aa11.99□□□□□ -0.49
HOXC4-203ENST00000507650 LCE6AA0A183 80 aa11.99□□□□□ -0.49
HOXC4-203ENST00000507650 ZNF207O43670 478 aaKnown RBP11.99□□□□□ -0.49
HOXC4-203ENST00000507650 SNAPC5O75971 98 aa11.99□□□□□ -0.49
HOXC4-203ENST00000507650 IGHV3-48P01763 117 aa11.99□□□□□ -0.49
HOXC4-203ENST00000507650 CTSGP08311 255 aa11.99□□□□□ -0.49
HOXC4-203ENST00000507650 SPINK9Q5DT21 86 aa11.99□□□□□ -0.49
HOXC4-203ENST00000507650 OR1P1Q8NH06 330 aa11.99□□□□□ -0.49
HOXC4-203ENST00000507650 BSCL2Q96G97 398 aaPredicted RBP11.99□□□□□ -0.49
HOXC4-203ENST00000507650 MRPL27Q9P0M9 148 aaKnown RBP11.99□□□□□ -0.49
HOXC4-203ENST00000507650 MTFP1Q9UDX5 166 aa11.99□□□□□ -0.49
HOXC4-203ENST00000507650 A0A0G2JRQ6 117 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 CD74P04233 296 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 PRCDQ00LT1 54 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 LPCAT3Q6P1A2 487 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 ZNF114Q8NC26 417 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 OR52B4Q8NGK2 314 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 MARC2Q969Z3 335 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 C5orf66Q9H5L9 145 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 PALMDQ9NP74 551 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 UFC1Q9Y3C8 167 aa11.98□□□□□ -0.49
HOXC4-203ENST00000507650 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 A0A0B4J293 547 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 NDUFA4O00483 81 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 CTDSP2O14595 271 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 PPP5CP53041 499 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 PIGPP57054 158 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 ODF3L2Q3SX64 289 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 FAAP20Q6NZ36 180 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 MZT2AQ6P582 158 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 H2BFWTQ7Z2G1 175 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 UBAC2Q8NBM4 344 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 ATP6V0BQ99437 205 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 DAZ1Q9NQZ3 744 aaKnown RBP11.97□□□□□ -0.49
HOXC4-203ENST00000507650 UBQLN2Q9UHD9 624 aa11.97□□□□□ -0.49
HOXC4-203ENST00000507650 SP6Q3SY56 376 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 RNASE10Q5GAN6 216 aaKnown RBP11.96□□□□□ -0.49
HOXC4-203ENST00000507650 SPSB3Q6PJ21 355 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 SLC16A13Q7RTY0 426 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 OR13C8Q8NGS7 320 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 AP3S1Q92572 193 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 MISP3Q96FF7 219 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 TMEM56Q96MV1 263 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 TSC22D3Q99576 134 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 OVOL2Q9BRP0 275 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 FKBP11Q9NYL4 201 aa11.96□□□□□ -0.49
HOXC4-203ENST00000507650 TSPAN4O14817 238 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 MT-CO2P00403 227 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 IFNA6P05013 189 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 PGAM2P15259 253 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 FCGR2BP31994 310 aaPredicted RBP11.95□□□□□ -0.5
HOXC4-203ENST00000507650 HSPE1P61604 102 aaKnown RBP11.95□□□□□ -0.5
HOXC4-203ENST00000507650 Q56UQ5 140 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 PVRIGQ6DKI7 326 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 ARRDC1Q8N5I2 433 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 TMEM229BQ8NBD8 167 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 OR1L6Q8NGR2 347 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 OR4A16Q8NH70 328 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 LHFPL5Q8TAF8 219 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 ZNF486Q96H40 463 aaPredicted RBP11.95□□□□□ -0.5
HOXC4-203ENST00000507650 C20orf24Q9BUV8 137 aa11.95□□□□□ -0.5
HOXC4-203ENST00000507650 MRPS26Q9BYN8 205 aaKnown RBP11.95□□□□□ -0.5
HOXC4-203ENST00000507650 MRPL36Q9P0J6 103 aaKnown RBP11.95□□□□□ -0.5
HOXC4-203ENST00000507650 IGHV3-49A0A0A0MS15 119 aa11.94□□□□□ -0.5
HOXC4-203ENST00000507650 K7EMT4 169 aa11.94□□□□□ -0.5
HOXC4-203ENST00000507650 ST8SIA3O43173 380 aa11.94□□□□□ -0.5
HOXC4-203ENST00000507650 EWSR1Q01844 656 aaKnown RBP eCLIP11.94□□□□□ -0.5
HOXC4-203ENST00000507650 Q6ZRM9 215 aa11.94□□□□□ -0.5
HOXC4-203ENST00000507650 RBPMS2Q6ZRY4 209 aaKnown RBP11.94□□□□□ -0.5
HOXC4-203ENST00000507650 MARCH1Q8TCQ1 289 aa11.94□□□□□ -0.5
HOXC4-203ENST00000507650 OR10C1Q96KK4 312 aa11.94□□□□□ -0.5
HOXC4-203ENST00000507650 RNF2Q99496 336 aa11.94□□□□□ -0.5
HOXC4-203ENST00000507650 SPAG8Q99932 426 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms