RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 FBN1P35555 2871 aaKnown RBP11.12□□□□□ -0.63
RNF4-208ENST00000507247 NPIPB5A8MRT5 1133 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 FBXO24O75426 580 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 CCNKO75909 580 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 CRYGCP07315 174 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 HKR1P10072 659 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
RNF4-208ENST00000507247 MFAP2P55001 183 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 ERHP84090 104 aaKnown RBP11.11□□□□□ -0.63
RNF4-208ENST00000507247 TMEM267Q0VDI3 215 aaPredicted RBP11.11□□□□□ -0.63
RNF4-208ENST00000507247 BSXQ3C1V8 233 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 HSD17B13Q7Z5P4 300 aaPredicted RBP11.11□□□□□ -0.63
RNF4-208ENST00000507247 OR2T35Q8NGX2 323 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 TMEM170AQ8WVE7 144 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 TMEM68Q96MH6 324 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 RAB40CQ96S21 281 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 WNT10AQ9GZT5 417 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 DMRT1Q9Y5R6 373 aa11.11□□□□□ -0.63
RNF4-208ENST00000507247 H3BP45 60 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 PRH1P02810 166 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 MDKP21741 143 aaPredicted RBP11.1□□□□□ -0.63
RNF4-208ENST00000507247 ZNF329Q86UD4 541 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 AKAP14Q86UN6 197 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
RNF4-208ENST00000507247 ZNF114Q8NC26 417 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 SLC24A4Q8NFF2 622 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 SMIM8Q96KF7 97 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 CIB3Q96Q77 187 aaPredicted RBP11.1□□□□□ -0.63
RNF4-208ENST00000507247 OR4C12Q96R67 309 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 P2RX4Q99571 388 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 NEURL2Q9BR09 285 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 ZFP57Q9NU63 452 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 PSENENQ9NZ42 101 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
RNF4-208ENST00000507247 F11RQ9Y624 299 aaKnown RBP11.1□□□□□ -0.63
RNF4-208ENST00000507247 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 C15orf62A8K5M9 175 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 L7N2F9 121 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 LYL1P12980 280 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 VAMP2P63027 116 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 SPANXN5Q5MJ07 72 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 PRSS54Q6PEW0 395 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 OR4F5Q8NH21 305 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 WIPF2Q8TF74 440 aaPredicted RBP11.09□□□□□ -0.63
RNF4-208ENST00000507247 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
RNF4-208ENST00000507247 FAM24AA6NFZ4 105 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 IFNA10P01566 189 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 IGLV1-40P01703 118 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 RLN2P04090 185 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 PET100P0DJ07 73 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 PVALBP20472 110 aaPredicted RBP11.08□□□□□ -0.64
RNF4-208ENST00000507247 NPY1RP25929 384 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 SNCAP37840 140 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 HTR2BP41595 481 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 TAS2R30P59541 319 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 DEFA5Q01523 94 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 C2orf83Q53S99 150 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 PVRIGQ6DKI7 326 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 TCTE3Q8IZS6 198 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 KLHDC1Q8N7A1 406 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 RNF114Q9Y508 228 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 U3KQ87 197 aa11.08□□□□□ -0.64
RNF4-208ENST00000507247 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 CLPSL1A2RUU4 121 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 E5RGE8 158 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 TSC22D2O75157 780 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 IGHG4P01861 327 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 DEFA4P12838 97 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 PROK1P58294 105 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 RPL23AP62750 156 aaKnown RBP11.07□□□□□ -0.64
RNF4-208ENST00000507247 FGL1Q08830 312 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 KLK9Q2XQG4 91 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 TMEM14EPQ6UXP3 125 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 LCNL1Q6ZST4 164 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 CENPVQ7Z7K6 275 aaPredicted RBP11.07□□□□□ -0.64
RNF4-208ENST00000507247 OR1P1Q8NH06 330 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 THAP6Q8TBB0 222 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 MS4A10Q96PG2 267 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 GON7Q9BXV9 100 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 KLK15Q9H2R5 256 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 ZNF355PQ9NSJ1 428 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 LYRM2Q9NU23 88 aaPredicted RBP11.07□□□□□ -0.64
RNF4-208ENST00000507247 KLK9Q9UKQ9 250 aa11.07□□□□□ -0.64
RNF4-208ENST00000507247 STRAPQ9Y3F4 350 aaKnown RBP11.07□□□□□ -0.64
RNF4-208ENST00000507247 TRBV9A0A0B4J1U6 114 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 IGSF23A1L1A6 192 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 PMS2P5A8MQ11 134 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 LY86O95711 162 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 SLC25A4P12235 298 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 PSMB8P28062 276 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 P2RY1P47900 373 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 CAV2P51636 162 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 SLC35B1P78383 322 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 SLC25A24Q6NUK1 477 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 OR11H4Q8NGC9 324 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 DCUN1D4Q92564 292 aa11.06□□□□□ -0.64
RNF4-208ENST00000507247 PAIP2BQ9ULR5 123 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms