RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 COMMD9Q9P000 198 aa7.33□□□□□ -1.24
CLCN3-205ENST00000506924 C14orf166Q9Y224 244 aaKnown RBP7.33□□□□□ -1.24
CLCN3-205ENST00000506924 VSIG4Q9Y279 399 aa7.33□□□□□ -1.24
CLCN3-205ENST00000506924 TEX13DA0A0J9YY54 714 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-205ENST00000506924 C3orf85A0A1B0GTC6 90 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 CGB1A6NKQ9 187 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 RBMXL2O75526 392 aaKnown RBP7.32□□□□□ -1.24
CLCN3-205ENST00000506924 SERPINE2P07093 398 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 CTSDP07339 412 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-205ENST00000506924 ETV6P41212 452 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 INPP1P49441 399 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 RND3P61587 244 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 TRIM16LQ309B1 348 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 CCDC71LQ8N9Z2 235 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 OR11H1Q8NG94 326 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 OR4A5Q8NH83 315 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 C4orf3Q8WVX3 66 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 ZNF486Q96H40 463 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-205ENST00000506924 UBE2E2Q96LR5 201 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 SDHCQ99643 169 aaPredicted RBP7.32□□□□□ -1.24
CLCN3-205ENST00000506924 SPIN2AQ99865 258 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 PRRT1Q99946 306 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 SPIN2BQ9BPZ2 258 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 HINT2Q9BX68 163 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 C5orf66Q9H5L9 145 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 SCP2D1Q9UJQ7 156 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 GPR132Q9UNW8 380 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 MGAM2Q2M2H8 2515 aa7.32□□□□□ -1.24
CLCN3-205ENST00000506924 TEX50A0A1B0GTY4 177 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 H0Y980 276 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 I3L521 148 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 SNAPC5O75971 98 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 PRB2P02812 416 aaPredicted RBP7.31□□□□□ -1.24
CLCN3-205ENST00000506924 OR5AC1P0C628 307 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 AKR1C4P17516 323 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 PTBP1P26599 531 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLCN3-205ENST00000506924 MAS1LP35410 378 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 MYCNOSP40205 109 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 AP3S2P59780 193 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 SUMO2P61956 95 aaKnown RBP7.31□□□□□ -1.24
CLCN3-205ENST00000506924 ZNF45Q02386 682 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 POU2AF1Q16633 256 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 TRIQKQ629K1 86 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 Q6ZWC4 215 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 H2BFWTQ7Z2G1 175 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 OR10W1Q8NGF6 305 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 OR1N2Q8NGR9 330 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 SEC22AQ96IW7 307 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 P2RX4Q99571 388 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 KRTAP4-5Q9BYR2 181 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 COMMD5Q9GZQ3 224 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 SLC25A32Q9H2D1 315 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 OR51B2Q9Y5P1 312 aa7.31□□□□□ -1.24
CLCN3-205ENST00000506924 IGHV4OR15-8A0A075B7B6 117 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 A0A087WW49 117 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 C13orf42A0A1B0GVH6 325 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 OR2J3O76001 311 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 IGKV1-5P01602 117 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 IGHV3-23P01764 117 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 LGALS1P09382 135 aaKnown RBP7.3□□□□□ -1.24
CLCN3-205ENST00000506924 NPSP0C0P6 89 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 FAUP35544 74 aaKnown RBP7.3□□□□□ -1.24
CLCN3-205ENST00000506924 CCR6P51684 374 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 RHOGP84095 191 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 DEFA6Q01524 100 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 SPINK9Q5DT21 86 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 TMED4Q7Z7H5 227 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 TTC9CQ8N5M4 171 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 GDPD1Q8N9F7 314 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 DPF1Q92782 380 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 TMEM230Q96A57 120 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 TMEM68Q96MH6 324 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 SLA2Q9H6Q3 261 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 NAA60Q9H7X0 242 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 SLC2A8Q9NY64 477 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 S4R3C0 116 aa7.3□□□□□ -1.24
CLCN3-205ENST00000506924 IGLC7A0M8Q6 106 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 CRYM-AS1A6NIL9 109 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 H0YIZ8 118 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 H3BUA1 57 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 NDUFB8O95169 186 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 TRBV12-3P01733 135 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 TRAPPC2P0DI81 140 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 TRAPPC2BP0DI82 140 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 DEFA4P12838 97 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 IL7P13232 177 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 PSMB6P28072 239 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 SLC6A1P30531 599 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 HOXD3P31249 432 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-205ENST00000506924 AKR1C2P52895 323 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 ZNF616Q08AN1 781 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 SURF2Q15527 256 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-205ENST00000506924 WFDC9Q8NEX5 89 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 OR4A16Q8NH70 328 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 RNASE11Q8TAA1 199 aaKnown RBP7.29□□□□□ -1.24
CLCN3-205ENST00000506924 LHFPL5Q8TAF8 219 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 GLYATL2Q8WU03 294 aa7.29□□□□□ -1.24
CLCN3-205ENST00000506924 QTRT1Q9BXR0 403 aaKnown RBP7.29□□□□□ -1.24
CLCN3-205ENST00000506924 FAM212BQ9NTI7 297 aaPredicted RBP7.29□□□□□ -1.24
CLCN3-205ENST00000506924 A0A0G2JLM5 398 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms