RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 E7EQL1 145 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 H0Y980 276 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 PANO1I0J062 215 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 K7N7A8 449 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 L7N2F9 121 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 SIRPB1O00241 398 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 SDCBPO00560 298 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 GOSR2O14653 212 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ITGB1BP1O14713 200 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TAAR5O14804 337 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB29O14966 203 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 NDUFB3O43676 98 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 YPEL1O60688 119 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2F2O95006 317 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CDS2O95674 445 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 IFNA7P01567 189 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CD8AP01732 235 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 SCTP09683 121 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 PSG2P11465 335 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC25A4P12235 298 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC25A6P12236 298 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 RCC1P18754 421 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CXCL3P19876 107 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 VDAC1P21796 283 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 F2RP25116 425 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 PSMB6P28072 239 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 GNRHRP30968 328 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CEACAM6P40199 344 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB7AP51149 207 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 AP2S1P53680 142 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 EDDM3BP56851 147 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 PIGPP57054 158 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM33P57088 247 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 FXYD4P59646 89 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 BPIFB3P59826 476 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 RPL32P62910 135 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CCL8P80075 99 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 AESQ08117 197 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CATR1Q13166 79 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 PPP1R1AQ13522 171 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2F1Q13607 317 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 GNMTQ14749 295 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ATXN7L3Q14CW9 347 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 HMGN3Q15651 99 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 Q3ZCU0 254 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TIGITQ495A1 244 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 LRRC10Q5BKY1 277 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2B11Q5JQS5 317 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 LY6G6FQ5SQ64 297 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 GPR157Q5UAW9 335 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 STUMQ69YW2 141 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF660Q6AZW8 331 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 THOC7Q6I9Y2 204 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF880Q6PDB4 577 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CLEC18BQ6UXF7 455 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 IL34Q6ZMJ4 242 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 Q6ZR03 302 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF826PQ6ZT77 177 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ACOT7LQ6ZUV0 252 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF767PQ75MW2 155 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 WDR86Q86TI4 376 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF546Q86UE3 836 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 LRP11Q86VZ4 500 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF695Q8IW36 515 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 H1FOOQ8IZA3 346 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF645Q8N7E2 425 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 OR11H7Q8NGC8 314 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 OR52M1Q8NGK5 317 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ANGPTL6Q8NI99 470 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 LRRC20Q8TCA0 184 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 MRPL30Q8TCC3 161 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CASTOR1Q8WTX7 329 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 IL1F10Q8WWZ1 152 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CCL17Q92583 94 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TNFRSF14Q92956 283 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ARL11Q969Q4 196 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ABHD14BQ96IU4 210 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ADTRPQ96IZ2 230 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF488Q96MN9 340 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM56Q96MV1 263 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 YPEL2Q96QA6 119 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 HSD17B10Q99714 261 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 SEC22CQ9BRL7 303 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 RTBDNQ9BSG5 229 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 BEX2Q9BXY8 128 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CHIAQ9BZP6 476 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 FGF23Q9GZV9 251 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TOLLIPQ9H0E2 274 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM222Q9H0R3 208 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 NAA60Q9H7X0 242 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 BEX1Q9HBH7 125 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 LPAR2Q9HBW0 351 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2S2Q9NQN1 319 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 PLSCR3Q9NRY6 295 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CBLN4Q9NTU7 201 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM106BQ9NUM4 274 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 RDH8Q9NYR8 311 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 TAS2R3Q9NYW6 316 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 PIPOXQ9P0Z9 390 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms