RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 PPP1R32Q7Z5V6 425 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 TMEM140Q9NV12 185 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 BOKQ9UMX3 212 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 SMPD2O60906 423 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 TFF1P04155 84 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 ADH4P08319 380 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 MPV17L2Q567V2 206 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 LDLRAD2Q5SZI1 272 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 PMS2CLQ68D20 193 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 IFI44Q8TCB0 444 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 BCL2L2Q92843 193 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 MBD6Q96DN6 1003 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 NABP2Q9BQ15 211 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 FREM2Q5SZK8 3169 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 FRYQ5TBA9 3013 aa14.05□□□□□ -0.16
SQSTM1-211ENST00000506690 FNDC10F2Z333 226 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 TNFSF15O95150 251 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 C11orf53Q8IXP5 236 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 KIR3DL3Q8N743 410 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 SAP25Q8TEE9 199 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 CORO2AQ92828 525 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 FRYLO94915 3013 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 PI4KAP42356 2102 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 CRXO43186 299 aaPredicted RBP14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 OR2J3O76001 311 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 TBC1D28Q2M2D7 210 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 ZNF826PQ6ZT77 177 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 ST20Q9HBF5 79 aa14.04□□□□□ -0.16
SQSTM1-211ENST00000506690 A0A1W2PRE2 83 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 C15orf61A6NNL5 157 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 IQCF6A8MYZ5 107 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 SPINT2O43291 252 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 OTX2P32243 289 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 RPL8P62917 257 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 SPINK14Q6IE38 97 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 ACP7Q6ZNF0 438 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 FAM216AQ8WUB2 273 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 VPS25Q9BRG1 176 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 TMEM70Q9BUB7 260 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 PILRBQ9UKJ0 227 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 RNF24Q9Y225 148 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 LOXL2Q9Y4K0 774 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 C21orf140B9A014 251 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 M0R1X1 148 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 CFIP05156 583 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 MFAP2P55001 183 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 RNASEKQ6P5S7 137 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 ZNF596Q8TC21 504 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 NANOS1Q8WY41 292 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 SSBP3Q9BWW4 388 aaPredicted RBP14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 FAM234AQ9H0X4 552 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 GCM1Q9NP62 436 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 C1RLQ9NZP8 487 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 TP73-AS1Q9UF72 201 aa14.03□□□□□ -0.16
SQSTM1-211ENST00000506690 CBY3A6NI87 242 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 OR7C2O60412 319 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 PSG1P11464 419 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 RTL8BQ17RB0 113 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 BVES-AS1Q5T3Y7 98 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 FAM231DQ6ZW35 169 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 ERASQ7Z444 233 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 CXorf67Q86X51 503 aaPredicted RBP14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 DEFB125Q8N687 156 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 NUP35Q8NFH5 326 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 DCTN5Q9BTE1 182 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 PLEKHA3Q9HB20 300 aa14.02□□□□□ -0.16
SQSTM1-211ENST00000506690 CELA3BP08861 270 aa14.02□□□□□ -0.17
SQSTM1-211ENST00000506690 FAM120AOSQ5T036 256 aa14.02□□□□□ -0.17
SQSTM1-211ENST00000506690 FAM90A1Q86YD7 464 aa14.02□□□□□ -0.17
SQSTM1-211ENST00000506690 URB1-AS1Q96HZ7 61 aa14.02□□□□□ -0.17
SQSTM1-211ENST00000506690 DOCK10Q96BY6 2186 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 OR4C46A6NHA9 309 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 LAMTOR5O43504 91 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 CA7P43166 264 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 LTC4SQ16873 150 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 TRAT1Q6PIZ9 186 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 NHLRC2Q8NBF2 726 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 SLC25A40Q8TBP6 338 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 ST6GALNAC6Q969X2 333 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 FAM122AQ96E09 287 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 OR2V2Q96R30 315 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 RPL39P5Q59GN2 51 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 NUDT10Q8NFP7 164 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 TRIB1Q96RU8 372 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 S1PR3Q99500 378 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 ZNF355PQ9NSJ1 428 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 TMEM14BQ9NUH8 114 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 FOXA2Q9Y261 457 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 WASHC3Q9Y3C0 194 aa14.01□□□□□ -0.17
SQSTM1-211ENST00000506690 OR2T8A6NH00 312 aa14□□□□□ -0.17
SQSTM1-211ENST00000506690 NUDT3O95989 172 aa14□□□□□ -0.17
SQSTM1-211ENST00000506690 TAS2R45P59539 299 aa14□□□□□ -0.17
SQSTM1-211ENST00000506690 HSPE1P61604 102 aaKnown RBP14□□□□□ -0.17
SQSTM1-211ENST00000506690 ASPHD1Q5U4P2 390 aa14□□□□□ -0.17
SQSTM1-211ENST00000506690 PLPPR2Q96GM1 343 aa14□□□□□ -0.17
SQSTM1-211ENST00000506690 GRAMD2BQ96HH9 432 aa14□□□□□ -0.17
SQSTM1-211ENST00000506690 FAM173AQ9BQD7 235 aa14□□□□□ -0.17
SQSTM1-211ENST00000506690 CLEC5AQ9NY25 188 aa14□□□□□ -0.17
SQSTM1-211ENST00000506690 IGKV1OR2-108A0A075B7D4 117 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms