RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CTRB2Q6GPI1 263 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 FAM219AQ8IW50 185 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 OR1L6Q8NGR2 347 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 OR5B3Q8NH48 314 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 S100ZQ8WXG8 99 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 LSM10Q969L4 123 aaKnown RBP5.62□□□□□ -1.51
GYPB-206ENST00000506516 PDCD10Q9BUL8 212 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 TMEM222Q9H0R3 208 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 NDUFA4L2Q9NRX3 87 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 PEF1Q9UBV8 284 aaKnown RBP5.62□□□□□ -1.51
GYPB-206ENST00000506516 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
GYPB-206ENST00000506516 LINC00854A0A1B0GVQ3 168 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 C15orf61A6NNL5 157 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 ZNF561-AS1K7EIQ3 104 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 OR2J3O76001 311 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 IFNA17P01571 189 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 PRH1P02810 166 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 VWFP04275 2813 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 OR5AC1P0C628 307 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 OR13C7P0DN81 318 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 ZP3P21754 424 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 HSPE1P61604 102 aaKnown RBP5.61□□□□□ -1.51
GYPB-206ENST00000506516 ERHP84090 104 aaKnown RBP5.61□□□□□ -1.51
GYPB-206ENST00000506516 DEFA6Q01524 100 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 FHL3Q13643 280 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 C15orf32Q32M92 178 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 CNPY1Q3B7I2 92 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 TMEM128Q5BJH2 165 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 C9orf66Q5T8R8 295 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 TMEM268Q5VZI3 342 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 SLC25A24Q6NUK1 477 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 ZNF343Q6P1L6 599 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 TMED4Q7Z7H5 227 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 ZNF429Q86V71 674 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 C1QL4Q86Z23 238 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 OR10W1Q8NGF6 305 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 GLYATL2Q8WU03 294 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 RBPMSQ93062 196 aaKnown RBP5.61□□□□□ -1.51
GYPB-206ENST00000506516 IL22RA2Q969J5 263 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 GALNT14Q96FL9 552 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 CXorf58Q96LI9 332 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 C7orf50Q9BRJ6 194 aaKnown RBP5.61□□□□□ -1.51
GYPB-206ENST00000506516 ALX4Q9H161 411 aaPredicted RBP5.61□□□□□ -1.51
GYPB-206ENST00000506516 AKIP1Q9NQ31 210 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 TMEM14BQ9NUH8 114 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 CACFD1Q9UGQ2 172 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 TMEM56-RWDD3S4R434 201 aa5.61□□□□□ -1.51
GYPB-206ENST00000506516 IGHV4OR15-8A0A075B7B6 117 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 A0A087WW49 117 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.6□□□□□ -1.51
GYPB-206ENST00000506516 A0A1B0GW64 132 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 IGLC7A0M8Q6 106 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 CGB1A6NKQ9 187 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 SEC14L6B5MCN3 397 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 OVOL1O14753 267 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 NDUFB8O95169 186 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 IGKV1-5P01602 117 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 REG1AP05451 166 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 IL7P13232 177 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 INSL3P51460 131 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 SUB1P53999 127 aaKnown RBP eCLIP5.6□□□□□ -1.51
GYPB-206ENST00000506516 SRPXP78539 464 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 EXOSC2Q13868 293 aaKnown RBP5.6□□□□□ -1.51
GYPB-206ENST00000506516 RBMS2Q15434 407 aaKnown RBP5.6□□□□□ -1.51
GYPB-206ENST00000506516 KLK9Q2XQG4 91 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 BEAN1Q3B7T3 259 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 SELENOHQ8IZQ5 122 aaKnown RBP5.6□□□□□ -1.51
GYPB-206ENST00000506516 LGI3Q8N145 548 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 DCUN1D4Q92564 292 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 DLX4Q92988 240 aaPredicted RBP5.6□□□□□ -1.51
GYPB-206ENST00000506516 EEF1AKMT3Q96AZ1 226 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 SDHCQ99643 169 aaPredicted RBP5.6□□□□□ -1.51
GYPB-206ENST00000506516 CCDC32Q9BV29 185 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 ELOVL1Q9BW60 279 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 PLEKHA3Q9HB20 300 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 ENY2Q9NPA8 101 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.6□□□□□ -1.51
GYPB-206ENST00000506516 KLK9Q9UKQ9 250 aa5.6□□□□□ -1.51
GYPB-206ENST00000506516 IGLV11-55A0A075B6I3 123 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 TRBV7-1A0A0A6YYK4 115 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 A0A0B4J293 547 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 DBX1A6NMT0 343 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 NDUFB6O95139 128 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 P0C879 139 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 SNCAP37840 140 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 CCR6P51684 374 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 SLURP1P55000 103 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 UBE2MP61081 183 aaKnown RBP5.59□□□□□ -1.51
GYPB-206ENST00000506516 PRCDQ00LT1 54 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 WT1-ASQ06250 92 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 TMEM187Q14656 261 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 ZNF846Q147U1 533 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 RPEL1Q2QD12 228 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 KPRPQ5T749 579 aaPredicted RBP5.59□□□□□ -1.51
GYPB-206ENST00000506516 CENPSQ8N2Z9 138 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 TMEM230Q96A57 120 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 OR4C12Q96R67 309 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 PTTG2Q9NZH5 202 aa5.59□□□□□ -1.51
GYPB-206ENST00000506516 F11RQ9Y624 299 aaKnown RBP5.59□□□□□ -1.51
GYPB-206ENST00000506516 A0A0B4J2A0 478 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms