RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 RBMS2Q15434 407 aaKnown RBP12.82□□□□□ -0.36
SNCA-209ENST00000506244 TMEM268Q5VZI3 342 aa12.82□□□□□ -0.36
SNCA-209ENST00000506244 ACSM6Q6P461 480 aa12.82□□□□□ -0.36
SNCA-209ENST00000506244 OR4C12Q96R67 309 aa12.82□□□□□ -0.36
SNCA-209ENST00000506244 C7orf50Q9BRJ6 194 aaKnown RBP12.82□□□□□ -0.36
SNCA-209ENST00000506244 CACFD1Q9UGQ2 172 aa12.82□□□□□ -0.36
SNCA-209ENST00000506244 DNAH3Q8TD57 4116 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 DBX1A6NMT0 343 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 NDUFB8O95169 186 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 IFNA17P01571 189 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 TRBV12-3P01733 135 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
SNCA-209ENST00000506244 BAK1Q16611 211 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 TMED4Q7Z7H5 227 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 VN1R17PQ8TDU5 208 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 TMEM230Q96A57 120 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 PEMTQ9UBM1 199 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 TMEM56-RWDD3S4R434 201 aa12.81□□□□□ -0.36
SNCA-209ENST00000506244 A0A0B4J293 547 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 BMPR1BO00238 502 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 GGCTO75223 188 aaKnown RBP12.8□□□□□ -0.36
SNCA-209ENST00000506244 PRB2P02812 416 aaPredicted RBP12.8□□□□□ -0.36
SNCA-209ENST00000506244 ARL3P36405 182 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 HOXA1P49639 335 aaPredicted RBP12.8□□□□□ -0.36
SNCA-209ENST00000506244 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 KLF5Q13887 457 aaPredicted RBP12.8□□□□□ -0.36
SNCA-209ENST00000506244 TMEM128Q5BJH2 165 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 SLC25A24Q6NUK1 477 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 SELENOHQ8IZQ5 122 aaKnown RBP12.8□□□□□ -0.36
SNCA-209ENST00000506244 OR2C3Q8N628 320 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 OR9G4Q8NGQ1 327 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 OR1P1Q8NH06 330 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 MRAPQ8TCY5 172 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 CCDC140Q96MF4 163 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 ENY2Q9NPA8 101 aa12.8□□□□□ -0.36
SNCA-209ENST00000506244 A6NHS1 94 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 INS-IGF2F8WCM5 200 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 ST8SIA3O43173 380 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 IL7P13232 177 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 KRTAP10-11P60412 298 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 TMEM187Q14656 261 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 IZUMO4Q1ZYL8 232 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 LGI3Q8N145 548 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 CENPSQ8N2Z9 138 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 LHFPL5Q8TAF8 219 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 BATF3Q9NR55 127 aa12.79□□□□□ -0.36
SNCA-209ENST00000506244 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.79□□□□□ -0.36
SNCA-209ENST00000506244 A0A0B4J2A0 478 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 DUXBA0A1W2PPF3 345 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 MFSD2BA6NFX1 497 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 UBE2MP61081 183 aaKnown RBP12.78□□□□□ -0.36
SNCA-209ENST00000506244 CNPY1Q3B7I2 92 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 AARDQ4LEZ3 155 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 CLEC19AQ6UXS0 136 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 OR52E5Q8NH55 327 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 SDHCQ99643 169 aaPredicted RBP12.78□□□□□ -0.36
SNCA-209ENST00000506244 CCDC32Q9BV29 185 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 PTTG2Q9NZH5 202 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 CACNG5Q9UF02 275 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 SHPKQ9UHJ6 478 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 DMRT1Q9Y5R6 373 aa12.78□□□□□ -0.36
SNCA-209ENST00000506244 A0A0G2JRQ6 117 aa12.77□□□□□ -0.37
SNCA-209ENST00000506244 PPP5D1E7EU14 171 aa12.77□□□□□ -0.37
SNCA-209ENST00000506244 IGHV3-23P01764 117 aa12.77□□□□□ -0.37
SNCA-209ENST00000506244 VAMP1P23763 118 aa12.77□□□□□ -0.37
SNCA-209ENST00000506244 SNCAP37840 140 aa12.77□□□□□ -0.37
SNCA-209ENST00000506244 SUB1P53999 127 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNCA-209ENST00000506244 SPCS3P61009 180 aa12.77□□□□□ -0.37
SNCA-209ENST00000506244 SUPT4H1P63272 117 aaKnown RBP12.77□□□□□ -0.37
SNCA-209ENST00000506244 GAR1Q9NY12 217 aaKnown RBP12.77□□□□□ -0.37
SNCA-209ENST00000506244 ZNF256Q9Y2P7 627 aaPredicted RBP12.77□□□□□ -0.37
SNCA-209ENST00000506244 CORTO00230 105 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 NDUFB6O95139 128 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 SULT1A3P0DMM9 295 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 SULT1A4P0DMN0 295 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 GPR183P32249 361 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 FAM106AQ4KMX7 169 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 BSCL2Q96G97 398 aaPredicted RBP12.76□□□□□ -0.37
SNCA-209ENST00000506244 C21orf62Q9NYP8 219 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 SIGLEC8Q9NYZ4 499 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 S4R3C0 116 aa12.76□□□□□ -0.37
SNCA-209ENST00000506244 PRKDCP78527 4128 aaKnown RBP12.76□□□□□ -0.37
SNCA-209ENST00000506244 LINC00854A0A1B0GVQ3 168 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 CLEC3BP05452 202 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 CCR6P51684 374 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 MFAP2P55001 183 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 SPSB3Q6PJ21 355 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 PLET1Q6UQ28 207 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 GPHB5Q86YW7 130 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 GPR146Q96CH1 333 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 MISP3Q96FF7 219 aa12.75□□□□□ -0.37
SNCA-209ENST00000506244 K7EIL1 84 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 K7EIM0 57 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 LGALS9O00182 355 aa12.74□□□□□ -0.37
SNCA-209ENST00000506244 TGOLN2O43493 480 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms