RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ARFGEF3Q5TH69 2177 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 DSCAML1Q8TD84 2053 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 MGST3O14880 152 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 MRPL54Q6P161 138 aaKnown RBP9.72□□□□□ -0.85
UBE3D-206ENST00000505226 FAM19A2Q8N3H0 131 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 NHLRC2Q8NBF2 726 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 OR4S2Q8NH73 311 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 PRO3102Q9H379 93 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 LNP1A1A4G5 178 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 SRRM4A7MD48 611 aaKnown RBP9.72□□□□□ -0.85
UBE3D-206ENST00000505226 PMCHP20382 165 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 GAGE1Q13065 139 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 MBNL2Q5VZF2 373 aaKnown RBP9.72□□□□□ -0.85
UBE3D-206ENST00000505226 MRPL52Q86TS9 123 aaKnown RBP9.72□□□□□ -0.85
UBE3D-206ENST00000505226 NIT1Q86X76 327 aa9.72□□□□□ -0.85
UBE3D-206ENST00000505226 IGLV1-44P01699 117 aa9.71□□□□□ -0.85
UBE3D-206ENST00000505226 IGKV1-16P04430 117 aa9.71□□□□□ -0.85
UBE3D-206ENST00000505226 AMTP48728 403 aa9.71□□□□□ -0.85
UBE3D-206ENST00000505226 SUMO1P63165 101 aaKnown RBP9.71□□□□□ -0.85
UBE3D-206ENST00000505226 MRPS11P82912 194 aaKnown RBP9.71□□□□□ -0.85
UBE3D-206ENST00000505226 TMEM164Q5U3C3 297 aa9.71□□□□□ -0.85
UBE3D-206ENST00000505226 C1orf174Q8IYL3 243 aa9.71□□□□□ -0.85
UBE3D-206ENST00000505226 RBM14Q96PK6 669 aaKnown RBP9.71□□□□□ -0.85
UBE3D-206ENST00000505226 IL19Q9UHD0 177 aa9.71□□□□□ -0.85
UBE3D-206ENST00000505226 OR51B2Q9Y5P1 312 aa9.71□□□□□ -0.85
UBE3D-206ENST00000505226 DMXL2Q8TDJ6 3036 aa9.71□□□□□ -0.85
UBE3D-206ENST00000505226 TRBV9A0A0B4J1U6 114 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 MMP23AO75900 390 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 MT-CO2P00403 227 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 SRIP30626 198 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 MAJINQ3KP22 176 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 OR9G1Q8NH87 305 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 IGF2BP2-AS1Q96M15 143 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 CDC42EP3Q9UKI2 254 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 TRAV5A0A0B4J249 113 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF253O75346 499 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 KCNS1Q96KK3 526 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 FER1L6-AS2Q96M78 137 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 RNF2Q99496 336 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 WNT10AQ9GZT5 417 aa9.71□□□□□ -0.86
UBE3D-206ENST00000505226 SLC25A10Q9UBX3 287 aaPredicted RBP9.71□□□□□ -0.86
UBE3D-206ENST00000505226 SMIM27A0A1W2PRY6 76 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 OR7C2O60412 319 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 C3orf79P0CE67 100 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 SLAQ13239 276 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 RAB31Q13636 194 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 SPATA45Q537H7 98 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 MOGAT3Q86VF5 341 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 STPG4Q8N801 248 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 OSTCQ9NRP0 149 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 KALRNO60229 2985 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 HOXC12P31275 282 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 OR10J3Q5JRS4 329 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 DHRS13Q6UX07 377 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 LYG1Q8N1E2 194 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 OR2V2Q96R30 315 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 SSBP3Q9BWW4 388 aaPredicted RBP9.7□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF586Q9NXT0 402 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 SVILO95425 2214 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 CACNA1GO43497 2377 aa9.7□□□□□ -0.86
UBE3D-206ENST00000505226 J3QR06 171 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 ISLRO14498 428 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 HYPMO75409 117 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 NDUFB8O95169 186 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 MGST1P10620 155 aaKnown RBP9.69□□□□□ -0.86
UBE3D-206ENST00000505226 KIR2DS2P43631 304 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 SRSF6Q13247 344 aaKnown RBP9.69□□□□□ -0.86
UBE3D-206ENST00000505226 PRR31Q5SQ13 230 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 GDF5OSQ5U4N7 250 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 DMRTA1Q5VZB9 504 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 ATOH7Q8N100 152 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 OR10W1Q8NGF6 305 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 TSKUQ8WUA8 353 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 GCM1Q9NP62 436 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF324O75467 553 aaPredicted RBP9.69□□□□□ -0.86
UBE3D-206ENST00000505226 CD59P13987 128 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 GNG10P50151 68 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 IBA57Q5T440 356 aaKnown RBP9.69□□□□□ -0.86
UBE3D-206ENST00000505226 LCN12Q6JVE5 192 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 OR4B1Q8NGF8 309 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 SNRNP40Q96DI7 357 aaKnown RBP9.69□□□□□ -0.86
UBE3D-206ENST00000505226 YLPM1P49750 1951 aaKnown RBP9.69□□□□□ -0.86
UBE3D-206ENST00000505226 LHBP01229 141 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 IGLC2P0DOY2 106 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 IGLC3P0DOY3 106 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 PPOXP50336 477 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 SSBP2P81877 361 aaPredicted RBP9.69□□□□□ -0.86
UBE3D-206ENST00000505226 TIGITQ495A1 244 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 ZNF439Q8NDP4 499 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 ENY2Q9NPA8 101 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 TMEM167BQ9NRX6 74 aa9.69□□□□□ -0.86
UBE3D-206ENST00000505226 TECRQ9NZ01 308 aaKnown RBP9.69□□□□□ -0.86
UBE3D-206ENST00000505226 DMXL1Q9Y485 3027 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 TEX50A0A1B0GTY4 177 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 C19orf67A6NJJ6 358 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 IGHG3P01860 377 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 TMEM178AQ8NBL3 297 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 FAM167A-AS1Q96KT0 104 aa9.68□□□□□ -0.86
UBE3D-206ENST00000505226 SERTAD4Q9NUC0 356 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms