RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 A0A0G2JLM5 398 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 C13orf42A0A1B0GVH6 325 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 FAM223BA6NKX1 122 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 ST8SIA3O43173 380 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 OR2J3O76001 311 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 ANXA7P20073 488 aaKnown RBP12.99□□□□□ -0.33
SYNE4-207ENST00000505054 KRTAP10-11P60412 298 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 UBE2MP61081 183 aaKnown RBP12.99□□□□□ -0.33
SYNE4-207ENST00000505054 EGFEM1PQ0D2K5 195 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 ASAH1Q13510 395 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 AARDQ4LEZ3 155 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 SPINK9Q5DT21 86 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 DEFB121Q5J5C9 76 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 LYZL2Q7Z4W2 148 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 FAM223AQ8IWN6 122 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 LGI3Q8N145 548 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 NECAP1Q8NC96 275 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 OR1N2Q8NGR9 330 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 USMG5Q96IX5 58 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 WWC2-AS2Q96NR7 200 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 GPR61Q9BZJ8 451 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 CACNG5Q9UF02 275 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 DNAH9Q9NYC9 4486 aa12.99□□□□□ -0.33
SYNE4-207ENST00000505054 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 A0A087WW49 117 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 A0A0B4J2A0 478 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 CD69Q07108 199 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 ZNF616Q08AN1 781 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 NMSQ5H8A3 153 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 LRTM2Q8N967 370 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 DPF1Q92782 380 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 B9D2Q9BPU9 175 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 C20orf85Q9H1P6 137 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 SHPKQ9UHJ6 478 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 FBXL7Q9UJT9 491 aa12.98□□□□□ -0.33
SYNE4-207ENST00000505054 NDUFB8O95169 186 aa12.97□□□□□ -0.33
SYNE4-207ENST00000505054 DHFRP00374 187 aa12.97□□□□□ -0.33
SYNE4-207ENST00000505054 TCRBP04435 133 aa12.97□□□□□ -0.33
SYNE4-207ENST00000505054 DEFA4P12838 97 aa12.97□□□□□ -0.33
SYNE4-207ENST00000505054 MECP2P51608 486 aaKnown RBP12.97□□□□□ -0.33
SYNE4-207ENST00000505054 MFAP2P55001 183 aa12.97□□□□□ -0.33
SYNE4-207ENST00000505054 ATP5G2Q06055 141 aa12.97□□□□□ -0.33
SYNE4-207ENST00000505054 EXOSC2Q13868 293 aaKnown RBP12.97□□□□□ -0.33
SYNE4-207ENST00000505054 C15orf32Q32M92 178 aa12.97□□□□□ -0.33
SYNE4-207ENST00000505054 ZNF343Q6P1L6 599 aa12.97□□□□□ -0.33
SYNE4-207ENST00000505054 F11RQ9Y624 299 aaKnown RBP12.97□□□□□ -0.33
SYNE4-207ENST00000505054 C9orf170A2RU37 121 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 ANKRD34BA5PLL1 514 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 LINC01619G3V211 115 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 TRBV12-3P01733 135 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 HLA-AP01891 365 aaKnown RBP12.96□□□□□ -0.33
SYNE4-207ENST00000505054 OR4E1P0C645 316 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 HIST1H1BP16401 226 aaKnown RBP12.96□□□□□ -0.33
SYNE4-207ENST00000505054 RAB25P57735 213 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 DHRS2Q13268 280 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 DCTN2Q13561 401 aaKnown RBP12.96□□□□□ -0.33
SYNE4-207ENST00000505054 OR2C3Q8N628 320 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 PLEKHA3Q9HB20 300 aa12.96□□□□□ -0.33
SYNE4-207ENST00000505054 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.96□□□□□ -0.33
SYNE4-207ENST00000505054 DUXBA0A1W2PPF3 345 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 IFNA17P01571 189 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 HSPB1P04792 205 aaKnown RBP12.95□□□□□ -0.34
SYNE4-207ENST00000505054 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 SULT1A3P0DMM9 295 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 SULT1A4P0DMN0 295 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 HOXD3P31249 432 aaPredicted RBP12.95□□□□□ -0.34
SYNE4-207ENST00000505054 SLURP1P55000 103 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 MZT2BQ6NZ67 158 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 LYG2Q86SG7 212 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 NUDT15Q9NV35 164 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 S4R3C0 116 aa12.95□□□□□ -0.34
SYNE4-207ENST00000505054 TRAV6A0A075B6T7 132 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 FAM240BA0A1B0GVZ2 78 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 MFSD2BA6NFX1 497 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 INS-IGF2F8WCM5 200 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 SPCS3P61009 180 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 C4orf46Q504U0 113 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 ZNF114Q8NC26 417 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 OR1P1Q8NH06 330 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 OR52E5Q8NH55 327 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 CCDC140Q96MF4 163 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 PDCD10Q9BUL8 212 aa12.94□□□□□ -0.34
SYNE4-207ENST00000505054 RANGRFQ9HD47 186 aaPredicted RBP12.94□□□□□ -0.34
SYNE4-207ENST00000505054 PEF1Q9UBV8 284 aaKnown RBP12.94□□□□□ -0.34
SYNE4-207ENST00000505054 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.93□□□□□ -0.34
SYNE4-207ENST00000505054 PIGBOS1A0A0B4J2F0 54 aa12.93□□□□□ -0.34
SYNE4-207ENST00000505054 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
SYNE4-207ENST00000505054 HOXA1P49639 335 aaPredicted RBP12.93□□□□□ -0.34
SYNE4-207ENST00000505054 SMCO1Q147U7 214 aa12.93□□□□□ -0.34
SYNE4-207ENST00000505054 SLC25A24Q6NUK1 477 aa12.93□□□□□ -0.34
SYNE4-207ENST00000505054 OR52B4Q8NGK2 314 aa12.93□□□□□ -0.34
SYNE4-207ENST00000505054 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
SYNE4-207ENST00000505054 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
SYNE4-207ENST00000505054 BMPR1BO00238 502 aa12.92□□□□□ -0.34
SYNE4-207ENST00000505054 NXPH3O95157 252 aa12.92□□□□□ -0.34
SYNE4-207ENST00000505054 HOXB5P09067 269 aa12.92□□□□□ -0.34
SYNE4-207ENST00000505054 ERHP84090 104 aaKnown RBP12.92□□□□□ -0.34
SYNE4-207ENST00000505054 TMED3Q9Y3Q3 217 aa12.92□□□□□ -0.34
SYNE4-207ENST00000505054 A0A1B0GU03 582 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms