RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CXorf58Q96LI9 332 aa9.78□□□□□ -0.84
DDX41-204ENST00000504807 SLC2A8Q9NY64 477 aa9.78□□□□□ -0.84
DDX41-204ENST00000504807 KLK11Q9UBX7 282 aa9.78□□□□□ -0.84
DDX41-204ENST00000504807 C15orf61A6NNL5 157 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 GABARAPO95166 117 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 SPINK9Q5DT21 86 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 PLET1Q6UQ28 207 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 OR1L8Q8NGR8 309 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 VN1R17PQ8TDU5 208 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 LSM10Q969L4 123 aaKnown RBP9.77□□□□□ -0.85
DDX41-204ENST00000504807 ABHD1Q96SE0 405 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 AIFM2Q9BRQ8 373 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 MIXL1Q9H2W2 232 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 UBQLN2Q9UHD9 624 aa9.77□□□□□ -0.85
DDX41-204ENST00000504807 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 IGKV1-5P01602 117 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 IFNA6P05013 189 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 P0C879 139 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 RCVRNP35243 200 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 ERVK-16P61578 105 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 ODF3L2Q3SX64 289 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 LHFPL1Q86WI0 220 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 CADM3Q8N126 398 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 OR52I2Q8NH67 350 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 TP53RKQ96S44 253 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 SCPEP1Q9HB40 452 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 C21orf62Q9NYP8 219 aa9.76□□□□□ -0.85
DDX41-204ENST00000504807 I3L2K1 104 aa9.75□□□□□ -0.85
DDX41-204ENST00000504807 CD3DP04234 171 aa9.75□□□□□ -0.85
DDX41-204ENST00000504807 CTSGP08311 255 aa9.75□□□□□ -0.85
DDX41-204ENST00000504807 CMTM1Q8IZ96 169 aa9.75□□□□□ -0.85
DDX41-204ENST00000504807 UBAC2Q8NBM4 344 aa9.75□□□□□ -0.85
DDX41-204ENST00000504807 OR52B4Q8NGK2 314 aa9.75□□□□□ -0.85
DDX41-204ENST00000504807 CMTM3Q96MX0 182 aa9.75□□□□□ -0.85
DDX41-204ENST00000504807 VCX3AQ9NNX9 186 aa9.75□□□□□ -0.85
DDX41-204ENST00000504807 MRPL27Q9P0M9 148 aaKnown RBP9.75□□□□□ -0.85
DDX41-204ENST00000504807 HERC1Q15751 4861 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 IGHV3-49A0A0A0MS15 119 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 UCP3P55916 312 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 TSPAN5P62079 268 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 ZNF124Q15973 351 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 GPR107Q5VW38 600 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 FAAP20Q6NZ36 180 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 BORCS5Q969J3 196 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 BSCL2Q96G97 398 aaPredicted RBP9.74□□□□□ -0.85
DDX41-204ENST00000504807 PRNDQ9UKY0 176 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 UFC1Q9Y3C8 167 aa9.74□□□□□ -0.85
DDX41-204ENST00000504807 A0A0B4J293 547 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 SNAPC5O75971 98 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 RORCP51449 518 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 ELLP55199 621 aaPredicted RBP9.73□□□□□ -0.85
DDX41-204ENST00000504807 PRCDQ00LT1 54 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 SPCS2Q15005 226 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 SP6Q3SY56 376 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 THOC7Q6I9Y2 204 aaKnown RBP9.73□□□□□ -0.85
DDX41-204ENST00000504807 HSD17B13Q7Z5P4 300 aaPredicted RBP9.73□□□□□ -0.85
DDX41-204ENST00000504807 SLC38A6Q8IZM9 456 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 OR1L6Q8NGR2 347 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 OR1P1Q8NH06 330 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 OR5B3Q8NH48 314 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 GGTLC1Q9BX51 225 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 C5orf66Q9H5L9 145 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 THYN1Q9P016 225 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 MRPL36Q9P0J6 103 aaKnown RBP9.73□□□□□ -0.85
DDX41-204ENST00000504807 EXTL2Q9UBQ6 330 aa9.73□□□□□ -0.85
DDX41-204ENST00000504807 FAM25AB3EWG3 89 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 FAM25CB3EWG5 89 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 FAM25GB3EWG6 89 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 NDUFA4O00483 81 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 TSPAN4O14817 238 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 DEDDO75618 318 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 MT-CO2P00403 227 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 APOHP02749 345 aaPredicted RBP9.72□□□□□ -0.85
DDX41-204ENST00000504807 ALDH3B2P48448 385 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 PPP5CP53041 499 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 RND3P61587 244 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 Q56UQ5 140 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 SLC16A13Q7RTY0 426 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 LILRB2Q8N423 598 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 MARC2Q969Z3 335 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 RNF2Q99496 336 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 KRTAP4-5Q9BYR2 181 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 DAZ1Q9NQZ3 744 aaKnown RBP9.72□□□□□ -0.85
DDX41-204ENST00000504807 FAM212BQ9NTI7 297 aaPredicted RBP9.72□□□□□ -0.85
DDX41-204ENST00000504807 MTFP1Q9UDX5 166 aa9.72□□□□□ -0.85
DDX41-204ENST00000504807 IGHV3OR16-13A0A075B7E8 117 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 LOC102724200A0A096LPH7 203 aaPredicted RBP9.71□□□□□ -0.86
DDX41-204ENST00000504807 IGHV3-74A0A0B4J1X5 117 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 TRAV25A0A0B4J276 109 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 SMIM31A0A1B0GVY4 71 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 CTDSP2O14595 271 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 CD74P04233 296 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 CTSDP07339 412 aaPredicted RBP9.71□□□□□ -0.86
DDX41-204ENST00000504807 ZNF182P17025 639 aaPredicted RBP9.71□□□□□ -0.86
DDX41-204ENST00000504807 PIGPP57054 158 aa9.71□□□□□ -0.86
DDX41-204ENST00000504807 MLANAQ16655 118 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms