RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 TNFSF10P50591 281 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 LOXL3P58215 753 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 OR5I1Q13606 314 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 PDLIM3Q53GG5 364 aaPredicted RBP5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 DNLZQ5SXM8 178 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CBLN4Q9NTU7 201 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TP53TG3Q9ULZ0 132 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ARFGEF3Q5TH69 2177 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 USP24Q9UPU5 2620 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ANKRD11Q6UB99 2663 aaPredicted RBP5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 IGHV2OR16-5A0A0B4J2B6 119 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 IGHV1-18A0A0C4DH31 117 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 F6UZH7 168 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 SPINK4O60575 86 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 WT1P19544 449 aaPredicted RBP5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 GATA2P23769 480 aaPredicted RBP5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TIMP3P35625 211 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TAS2R60P59551 318 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 SMIM21Q3B7S5 101 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 KCNIP4Q6PIL6 250 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 FDCSPQ8NFU4 85 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TMEM18Q96B42 140 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 HINT2Q9BX68 163 aa5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 INTS1Q8N201 2190 aaKnown RBP5.38□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 PDE6DO43924 150 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 HPRT1P00492 218 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 GCGP01275 180 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 IL6RP08887 468 aaPredicted RBP5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 STAG3L2P0CL84 134 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 STAG3L3P0CL85 134 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 APOBEC3AP31941 199 aaPredicted RBP5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 SPCS3P61009 180 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ZNF718Q3SXZ3 478 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 SNRNP40Q96DI7 357 aaKnown RBP5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 NDUFAF3Q9BU61 184 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 IFI27L2Q9H2X8 130 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 KCNIP2Q9NS61 270 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 FKBP11Q9NYL4 201 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TCF19Q9Y242 345 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 MDFIC2A0A1B0GVS7 189 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 MMP23AO75900 390 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CGAP01215 116 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ADH4P08319 380 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 IGFBP2P18065 325 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 KITLGP21583 273 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 GCHFRP30047 84 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 OPRK1P41145 380 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 RPL31P62899 125 aaKnown RBP5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 SLC35B1P78383 322 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 HTD2P86397 168 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 GUSBP1Q15486 140 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 EFNB3Q15768 340 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CD300EQ496F6 205 aaPredicted RBP5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CT45A1Q5HYN5 189 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 MIR17HGQ75NE6 70 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 GCSAMQ8N6F7 178 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 SYT8Q8NBV8 401 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 DEFB108BQ8NET1 73 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 OR4P4Q8NGL7 312 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CT45A3Q8NHU0 189 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 C2orf88Q9BSF0 95 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 SNHG12Q9BXW3 62 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TNCP24821 2201 aa5.37□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 KALRNO60229 2985 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 APC2O95996 2303 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ZNF705FA8MVS1 300 aaPredicted RBP5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 SPRY3O43610 288 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CA2P00918 260 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ZNF705DP0CH99 300 aaPredicted RBP5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ZNF705BP0CI00 300 aaPredicted RBP5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ZNF83P51522 516 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 KRTCAP3Q53RY4 240 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 Q6ZWC4 215 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 RPRMLQ8N4K4 120 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TMEM178AQ8NBL3 297 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 OR10G8Q8NGN5 311 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 NOL4LQ96MY1 436 aaPredicted RBP5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 MS4A10Q96PG2 267 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 OR2V2Q96R30 315 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 S1PR3Q99500 378 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 RNF114Q9Y508 228 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 MAP1BP46821 2468 aaKnown RBP5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ADGRG4Q8IZF6 3080 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CXorf1O96002 111 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 G0S2P27469 103 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CDKN1AP38936 164 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 GNG10P50151 68 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 RAB4BP61018 213 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 LCN2P80188 198 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 ZNF90Q03938 601 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 C17orf58Q2M2W7 97 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 KIAA1644Q3SXP7 199 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TCTEX1D1Q8N7M0 179 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 FAM216AQ8WUB2 273 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 RAB1CQ92928 201 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 TBX15Q96SF7 602 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 DCAF16Q9NXF7 216 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 CALYQ9NYX4 217 aa5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 LSM4Q9Y4Z0 139 aaKnown RBP5.36□□□□□ -1.55
NPHP3-AS1-202ENST00000504440 DSCAMO60469 2012 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms