RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 RASL11AQ6T310 242 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 MOGAT3Q86VF5 341 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 OR8I2Q8N0Y5 310 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 MBD3L2Q8NHZ7 208 aaPredicted RBP12.25□□□□□ -0.45
SNF8-203ENST00000504000 ZNF503Q96F45 646 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 PARD6AQ9NPB6 346 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 TNRC18O15417 2968 aaPredicted RBP12.25□□□□□ -0.45
SNF8-203ENST00000504000 CRYBB3P26998 211 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 SLC25A48Q6ZT89 311 aaKnown RBP12.25□□□□□ -0.45
SNF8-203ENST00000504000 SIGLECL1Q8N7X8 197 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 ST6GALNAC3Q8NDV1 305 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 FDCSPQ8NFU4 85 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 RNF7Q9UBF6 113 aa12.25□□□□□ -0.45
SNF8-203ENST00000504000 SMIM27A0A1W2PRY6 76 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 HLA-DQA1P01909 254 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 CRYABP02511 175 aaKnown RBP12.24□□□□□ -0.45
SNF8-203ENST00000504000 C8orf88P0DMB2 117 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 STUMQ69YW2 141 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 TMEM136Q6ZRR5 245 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 LYG1Q8N1E2 194 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 SLC25A33Q9BSK2 321 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 VAMP8Q9BV40 100 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 SAMD10Q9BYL1 202 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 COMMD5Q9GZQ3 224 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 FRYQ5TBA9 3013 aa12.24□□□□□ -0.45
SNF8-203ENST00000504000 IGKV1OR2-108A0A075B7D4 117 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 TEX50A0A1B0GTY4 177 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 IGLV2-8P01709 118 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 IGHV3-7P01780 117 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 COMPP49747 757 aaPredicted RBP12.23□□□□□ -0.45
SNF8-203ENST00000504000 GAGE1Q13065 139 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 OR4B1Q8NGF8 309 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 IGF2BP2-AS1Q96M15 143 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 GNB4Q9HAV0 340 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 ZNF586Q9NXT0 402 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 NAT8BQ9UHF3 227 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 AMY1AP04745 511 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 RPLP1P05386 114 aaKnown RBP12.23□□□□□ -0.45
SNF8-203ENST00000504000 CT45A6P0DMU7 189 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 CT45A5P0DMU8 189 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 CT45A7P0DMV0 189 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 CCL11P51671 97 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 CD69Q07108 199 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 OR5I1Q13606 314 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 UTF1Q5T230 341 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 ZNF705AQ6ZN79 300 aaPredicted RBP12.23□□□□□ -0.45
SNF8-203ENST00000504000 OSR1Q8TAX0 266 aaPredicted RBP12.23□□□□□ -0.45
SNF8-203ENST00000504000 WIPF2Q8TF74 440 aaPredicted RBP12.23□□□□□ -0.45
SNF8-203ENST00000504000 ATG101Q9BSB4 218 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 RPUSD1Q9UJJ7 312 aaKnown RBP12.23□□□□□ -0.45
SNF8-203ENST00000504000 CDC42EP3Q9UKI2 254 aa12.23□□□□□ -0.45
SNF8-203ENST00000504000 GGTLC3B5MD39 225 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 ACTL6BO94805 426 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 RNASE2P10153 161 aaKnown RBP12.22□□□□□ -0.45
SNF8-203ENST00000504000 SPRNQ5BIV9 151 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 ZNF788Q6ZQV5 615 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 ITLN1Q8WWA0 313 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 LEAP2Q969E1 77 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 KCNS1Q96KK3 526 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 SLC35D1Q9NTN3 355 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 DSCAML1Q8TD84 2053 aa12.22□□□□□ -0.45
SNF8-203ENST00000504000 PSMB11A5LHX3 300 aa12.21□□□□□ -0.45
SNF8-203ENST00000504000 OR7C2O60412 319 aa12.21□□□□□ -0.45
SNF8-203ENST00000504000 CDKN1AP38936 164 aa12.21□□□□□ -0.45
SNF8-203ENST00000504000 IBA57Q5T440 356 aaKnown RBP12.21□□□□□ -0.45
SNF8-203ENST00000504000 ZNF714Q96N38 554 aa12.21□□□□□ -0.45
SNF8-203ENST00000504000 GCM1Q9NP62 436 aa12.21□□□□□ -0.45
SNF8-203ENST00000504000 NKX2-8O15522 239 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 CD33P20138 364 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 SUMO1P63165 101 aaKnown RBP12.21□□□□□ -0.46
SNF8-203ENST00000504000 TDRG1Q3Y452 100 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 ZNF833PQ6ZTB9 187 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 DOLPP1Q86YN1 238 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 Q8N976 141 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 VN1R17PQ8TDU5 208 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 GAFA1Q96PS6 74 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 HINT2Q9BX68 163 aa12.21□□□□□ -0.46
SNF8-203ENST00000504000 MRPL27Q9P0M9 148 aaKnown RBP12.21□□□□□ -0.46
SNF8-203ENST00000504000 IZUMO1RA6ND01 250 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 SRRM4A7MD48 611 aaKnown RBP12.2□□□□□ -0.46
SNF8-203ENST00000504000 SPRY3O43610 288 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 ZNF253O75346 499 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 FRMD6-AS1P0C7T7 363 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 ZNF83P51522 516 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 TEX36Q5VZQ5 186 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 SEM1Q6ZVN7 128 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 FAM167A-AS1Q96KT0 104 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 RNASE7Q9H1E1 156 aaKnown RBP12.2□□□□□ -0.46
SNF8-203ENST00000504000 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 FBXL7Q9UJT9 491 aa12.2□□□□□ -0.46
SNF8-203ENST00000504000 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
SNF8-203ENST00000504000 A0A1W2PS18 150 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 hADV38S2A0JD32 116 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 F2Z2F3 143 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 M0R1B8 84 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 DLL1O00548 723 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 MYOD1P15172 320 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 CTRLP40313 264 aa12.19□□□□□ -0.46
SNF8-203ENST00000504000 SELENOVP59797 346 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms