RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 ATP5G3P48201 142 aa18.17■□□□□ 0.5
PCDH1-204ENST00000503492 GAMTQ14353 236 aa18.17■□□□□ 0.5
PCDH1-204ENST00000503492 ADIRFQ15847 76 aa18.17■□□□□ 0.5
PCDH1-204ENST00000503492 SPATA31B1PQ5VZV4 182 aa18.17■□□□□ 0.5
PCDH1-204ENST00000503492 TNFRSF14Q92956 283 aa18.17■□□□□ 0.5
PCDH1-204ENST00000503492 SLC45A2Q9UMX9 530 aa18.17■□□□□ 0.5
PCDH1-204ENST00000503492 TGIF2-C20orf24A0A0A6YYL0 155 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 PPIAL4CA0A0B4J2A2 164 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 INS-IGF2F8WCM5 200 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 PPIAL4GP0DN37 164 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 SNRPEP62304 92 aaKnown RBP18.16■□□□□ 0.5
PCDH1-204ENST00000503492 HLA-DRB5Q30154 266 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 RAB1BQ9H0U4 201 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 TPSG1Q9NRR2 321 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 CBLN4Q9NTU7 201 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 SLC25A17O43808 307 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 CXorf1O96002 111 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 RPS10P46783 165 aaKnown RBP18.16■□□□□ 0.5
PCDH1-204ENST00000503492 RND2P52198 227 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 RPL23P62829 140 aaKnown RBP18.16■□□□□ 0.5
PCDH1-204ENST00000503492 ERHP84090 104 aaKnown RBP18.16■□□□□ 0.5
PCDH1-204ENST00000503492 SSX3Q99909 188 aa18.16■□□□□ 0.5
PCDH1-204ENST00000503492 CLDN34H7C241 214 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 ENSAO43768 121 aaKnown RBP18.15■□□□□ 0.5
PCDH1-204ENST00000503492 RPL35P42766 123 aaKnown RBP18.15■□□□□ 0.5
PCDH1-204ENST00000503492 WT1-ASQ06250 92 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 CD69Q07108 199 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 MRGPRG-AS1Q2M3A8 158 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 CST9LP1Q5W188 147 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 C11orf71Q6IPW1 123 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 C1QL4Q86Z23 238 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 PRORYQ9H606 182 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 AKR1D1P51857 326 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 PRRX1P54821 245 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 VMA21Q3ZAQ7 101 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 OR51G1Q8NGK1 321 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 PRELID1Q9Y255 219 aa18.15■□□□□ 0.5
PCDH1-204ENST00000503492 A0A1W2PN81 502 aa18.14■□□□□ 0.49
PCDH1-204ENST00000503492 SOD3P08294 240 aa18.14■□□□□ 0.49
PCDH1-204ENST00000503492 CHRNA7P36544 502 aa18.14■□□□□ 0.49
PCDH1-204ENST00000503492 RHOBP62745 196 aa18.14■□□□□ 0.49
PCDH1-204ENST00000503492 OR8B3Q8NGG8 313 aa18.14■□□□□ 0.49
PCDH1-204ENST00000503492 C8orf46Q8TAG6 207 aa18.14■□□□□ 0.49
PCDH1-204ENST00000503492 OR8B2Q96RD0 313 aa18.14■□□□□ 0.49
PCDH1-204ENST00000503492 CLEC7AQ9BXN2 247 aa18.14■□□□□ 0.49
PCDH1-204ENST00000503492 C5orf52A6NGY3 159 aa18.13■□□□□ 0.49
PCDH1-204ENST00000503492 GNB1P62873 340 aa18.13■□□□□ 0.49
PCDH1-204ENST00000503492 BUB1B-PAK6H3BSN5 160 aa18.13■□□□□ 0.49
PCDH1-204ENST00000503492 DLL1O00548 723 aa18.13■□□□□ 0.49
PCDH1-204ENST00000503492 OR10J1P30954 320 aa18.13■□□□□ 0.49
PCDH1-204ENST00000503492 LGALS7P47929 136 aa18.13■□□□□ 0.49
PCDH1-204ENST00000503492 KIAA0141Q14154 515 aaPredicted RBP18.13■□□□□ 0.49
PCDH1-204ENST00000503492 CTDSP1Q9GZU7 261 aa18.13■□□□□ 0.49
PCDH1-204ENST00000503492 MIOXQ9UGB7 285 aa18.13■□□□□ 0.49
PCDH1-204ENST00000503492 PDE6DO43924 150 aa18.12■□□□□ 0.49
PCDH1-204ENST00000503492 LINC00518Q8N0U6 118 aa18.12■□□□□ 0.49
PCDH1-204ENST00000503492 FOXH1O75593 365 aa18.12■□□□□ 0.49
PCDH1-204ENST00000503492 RBP4P02753 201 aa18.12■□□□□ 0.49
PCDH1-204ENST00000503492 S100A6P06703 90 aa18.12■□□□□ 0.49
PCDH1-204ENST00000503492 GATA2P23769 480 aaPredicted RBP18.12■□□□□ 0.49
PCDH1-204ENST00000503492 COX7A1P24310 79 aa18.12■□□□□ 0.49
PCDH1-204ENST00000503492 BEND2Q8NDZ0 799 aa18.12■□□□□ 0.49
PCDH1-204ENST00000503492 GCHFRP30047 84 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 SLC16A13Q7RTY0 426 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 IGHV1-3A0A0C4DH29 117 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 C22orf46C9J442 243 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 ACTL6BO94805 426 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 C16orf82Q7Z2V1 217 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 LY6G5BQ8NDX9 201 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 OR2T6Q8NHC8 308 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 CACNG8Q8WXS5 425 aa18.11■□□□□ 0.49
PCDH1-204ENST00000503492 CNTFRP26992 372 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 FAM78BQ5VT40 261 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 MIR17HGQ75NE6 70 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 OR4P4Q8NGL7 312 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 INSIG2Q9Y5U4 225 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 A0A1W2PPI3 338 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 GPX4P36969 197 aaPredicted RBP18.1■□□□□ 0.49
PCDH1-204ENST00000503492 UNQ6494/PRO21346Q6UXR6 183 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 NANPQ8TBE9 248 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 DERL1Q9BUN8 251 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 ONECUT1Q9UBC0 465 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 YTHDF2Q9Y5A9 579 aaKnown RBP18.1■□□□□ 0.49
PCDH1-204ENST00000503492 CHD8Q9HCK8 2581 aa18.1■□□□□ 0.49
PCDH1-204ENST00000503492 PLXNB1O43157 2135 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 NCOR2Q9Y618 2525 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 F6UZH7 168 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 NDUFB4O95168 129 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 IGHV2-5P01817 119 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 SFTPCP11686 197 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 TEX45Q8NA69 505 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 SLC35E1Q96K37 410 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 FNDC4Q9H6D8 234 aaPredicted RBP18.09■□□□□ 0.49
PCDH1-204ENST00000503492 CRYGBP07316 175 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 TIMD4Q96H15 378 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 ACY3Q96HD9 319 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 FAM210BQ96KR6 192 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 TXNDC17Q9BRA2 123 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 FUT9Q9Y231 359 aa18.09■□□□□ 0.49
PCDH1-204ENST00000503492 UBE2CO00762 179 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms