RNA–Protein interactions for RNA: ENST00000502730.5

TNFRSF25-217, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-217ENST00000502730 ZNF436Q9C0F3 470 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF25-217ENST00000502730 MIXL1Q9H2W2 232 aa17.04■□□□□ 0.32
TNFRSF25-217ENST00000502730 HIPK2Q9H2X6 1198 aa17.04■□□□□ 0.32
TNFRSF25-217ENST00000502730 PRNDQ9UKY0 176 aa17.04■□□□□ 0.32
TNFRSF25-217ENST00000502730 CD3DP04234 171 aa17.03■□□□□ 0.32
TNFRSF25-217ENST00000502730 C8orf88P0DMB2 117 aa17.03■□□□□ 0.32
TNFRSF25-217ENST00000502730 HSD17B13Q7Z5P4 300 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF25-217ENST00000502730 LHFPL1Q86WI0 220 aa17.03■□□□□ 0.32
TNFRSF25-217ENST00000502730 TMEM190Q8WZ59 177 aa17.03■□□□□ 0.32
TNFRSF25-217ENST00000502730 RYR2Q92736 4967 aa17.03■□□□□ 0.32
TNFRSF25-217ENST00000502730 ADMP35318 185 aa17.02■□□□□ 0.32
TNFRSF25-217ENST00000502730 OR5B3Q8NH48 314 aa17.02■□□□□ 0.32
TNFRSF25-217ENST00000502730 AP3S1Q92572 193 aa17.02■□□□□ 0.32
TNFRSF25-217ENST00000502730 ISOC1Q96CN7 298 aa17.02■□□□□ 0.32
TNFRSF25-217ENST00000502730 FAM212BQ9NTI7 297 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF25-217ENST00000502730 ALDH3B2P48448 385 aa17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 PPP5CP53041 499 aa17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 SPCS2Q15005 226 aa17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 SPINK9Q5DT21 86 aa17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 RNASE10Q5GAN6 216 aaKnown RBP17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 UBAC2Q8NBM4 344 aa17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 TP53RKQ96S44 253 aa17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 C21orf62Q9NYP8 219 aa17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 MTFP1Q9UDX5 166 aa17.01■□□□□ 0.31
TNFRSF25-217ENST00000502730 SACSQ9NZJ4 4579 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 ZNF207O43670 478 aaKnown RBP17■□□□□ 0.31
TNFRSF25-217ENST00000502730 IGKV1-5P01602 117 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 PGAM2P15259 253 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 S100GP29377 79 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 H2BFWTQ7Z2G1 175 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 OR52B4Q8NGK2 314 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 BSCL2Q96G97 398 aaPredicted RBP17■□□□□ 0.31
TNFRSF25-217ENST00000502730 TMEM56Q96MV1 263 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 TSC22D3Q99576 134 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 MRPS26Q9BYN8 205 aaKnown RBP17■□□□□ 0.31
TNFRSF25-217ENST00000502730 PALMDQ9NP74 551 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 MRPL27Q9P0M9 148 aaKnown RBP17■□□□□ 0.31
TNFRSF25-217ENST00000502730 UFC1Q9Y3C8 167 aa17■□□□□ 0.31
TNFRSF25-217ENST00000502730 CYB5BO43169 146 aa16.99■□□□□ 0.31
TNFRSF25-217ENST00000502730 IGHV3-48P01763 117 aa16.99■□□□□ 0.31
TNFRSF25-217ENST00000502730 OR2C3Q8N628 320 aa16.99■□□□□ 0.31
TNFRSF25-217ENST00000502730 FKBP11Q9NYL4 201 aa16.99■□□□□ 0.31
TNFRSF25-217ENST00000502730 CTDSP2O14595 271 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 IFNA6P05013 189 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 ELLP55199 621 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 PIGPP57054 158 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 RND3P61587 244 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 PRCDQ00LT1 54 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 Q56UQ5 140 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 FAAP20Q6NZ36 180 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 SLC16A13Q7RTY0 426 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 OR4A16Q8NH70 328 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 MARC2Q969Z3 335 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 MISP3Q96FF7 219 aa16.98■□□□□ 0.31
TNFRSF25-217ENST00000502730 I3L2K1 104 aa16.97■□□□□ 0.31
TNFRSF25-217ENST00000502730 GPR141Q7Z602 305 aa16.97■□□□□ 0.31
TNFRSF25-217ENST00000502730 ARRDC1Q8N5I2 433 aa16.97■□□□□ 0.31
TNFRSF25-217ENST00000502730 OR1P1Q8NH06 330 aa16.97■□□□□ 0.31
TNFRSF25-217ENST00000502730 C20orf24Q9BUV8 137 aa16.97■□□□□ 0.31
TNFRSF25-217ENST00000502730 NDUFA4O00483 81 aa16.96■□□□□ 0.31
TNFRSF25-217ENST00000502730 CTSGP08311 255 aa16.96■□□□□ 0.31
TNFRSF25-217ENST00000502730 P0C879 139 aa16.96■□□□□ 0.31
TNFRSF25-217ENST00000502730 SP6Q3SY56 376 aa16.96■□□□□ 0.31
TNFRSF25-217ENST00000502730 SPSB3Q6PJ21 355 aa16.96■□□□□ 0.31
TNFRSF25-217ENST00000502730 OR13C8Q8NGS7 320 aa16.96■□□□□ 0.31
TNFRSF25-217ENST00000502730 DAZ1Q9NQZ3 744 aaKnown RBP16.96■□□□□ 0.31
TNFRSF25-217ENST00000502730 RGS5O15539 181 aa16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 CD74P04233 296 aa16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 HSPE1P61604 102 aaKnown RBP16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 SCGB2B2Q4G0G5 96 aa16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 RBPMS2Q6ZRY4 209 aaKnown RBP16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 TMEM229BQ8NBD8 167 aa16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 OR1L6Q8NGR2 347 aa16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 MARCH1Q8TCQ1 289 aa16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 ZNF486Q96H40 463 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 C5orf66Q9H5L9 145 aa16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 UBQLN2Q9UHD9 624 aa16.95■□□□□ 0.3
TNFRSF25-217ENST00000502730 TRAV25A0A0B4J276 109 aa16.94■□□□□ 0.3
TNFRSF25-217ENST00000502730 A0A0B4J293 547 aa16.94■□□□□ 0.3
TNFRSF25-217ENST00000502730 A0A0G2JRQ6 117 aa16.94■□□□□ 0.3
TNFRSF25-217ENST00000502730 C3orf85A0A1B0GTC6 90 aa16.94■□□□□ 0.3
TNFRSF25-217ENST00000502730 RAB3DO95716 219 aa16.94■□□□□ 0.3
TNFRSF25-217ENST00000502730 MT-CO2P00403 227 aa16.94■□□□□ 0.3
TNFRSF25-217ENST00000502730 CLVS1Q8IUQ0 354 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF25-217ENST00000502730 ZNF114Q8NC26 417 aa16.94■□□□□ 0.3
TNFRSF25-217ENST00000502730 TBPP20226 339 aa16.93■□□□□ 0.3
TNFRSF25-217ENST00000502730 STEAP1BQ6NZ63 245 aa16.93■□□□□ 0.3
TNFRSF25-217ENST00000502730 TERB2Q8NHR7 220 aa16.93■□□□□ 0.3
TNFRSF25-217ENST00000502730 PINX1Q96BK5 328 aaKnown RBP16.93■□□□□ 0.3
TNFRSF25-217ENST00000502730 ATP6V0BQ99437 205 aa16.93■□□□□ 0.3
TNFRSF25-217ENST00000502730 LYSTQ99698 3801 aa16.93■□□□□ 0.3
TNFRSF25-217ENST00000502730 IGHV3-49A0A0A0MS15 119 aa16.92■□□□□ 0.3
TNFRSF25-217ENST00000502730 GABARAPH6UMI1 98 aa16.92■□□□□ 0.3
TNFRSF25-217ENST00000502730 ST8SIA3O43173 380 aa16.92■□□□□ 0.3
TNFRSF25-217ENST00000502730 AKR1C2P52895 323 aa16.92■□□□□ 0.3
TNFRSF25-217ENST00000502730 TAS2R19P59542 299 aa16.92■□□□□ 0.3
TNFRSF25-217ENST00000502730 GGTLC1Q9BX51 225 aa16.92■□□□□ 0.3
TNFRSF25-217ENST00000502730 LCE6AA0A183 80 aa16.91■□□□□ 0.3
TNFRSF25-217ENST00000502730 TSPAN4O14817 238 aa16.91■□□□□ 0.3
TNFRSF25-217ENST00000502730 ANKRD55Q3KP44 614 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms