RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 GABARAPL1Q9H0R8 117 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF702PQ9H963 129 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 SDF2L1Q9HCN8 221 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 LHX9Q9NQ69 397 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 GSKIPQ9P0R6 139 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 ADGRG4Q8IZF6 3080 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 POLEQ07864 2286 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 SDK2Q58EX2 2172 aa3.17□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZFC3H1O60293 1989 aaKnown RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 LRBAP50851 2863 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 AKAP9Q99996 3911 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 TACC2O95359 2948 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 FAM236DA0A1B0GTK5 79 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 A0A1W2PQD3 144 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 PQLC2LA1A4F0 135 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 IFITM10A6NMD0 228 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 RIIAD1A6NNX1 92 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 KRTAP4-16G5E9R7 235 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 UPK2O00526 184 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 PEX7O00628 323 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF207O43670 478 aaKnown RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 NDUFA2O43678 99 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 HBZP02008 142 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 BGLAPP02818 100 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR5G3P0C626 314 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 FAM236CP0DP71 79 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 SCGB1A1P11684 91 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 CCL4P13236 92 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 GZMHP20718 246 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 OMGP23515 440 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 CRHBPP24387 322 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 PEBP1P30086 187 aaKnown RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 SLC25A1P53007 311 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 RIPPLY3P57055 190 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 IGLV3-21P80748 117 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 PAX8Q06710 450 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 CENPWQ5EE01 88 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 TEX30Q5JUR7 227 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF774Q6NX45 483 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 FAM19A3Q7Z5A8 133 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 EIF4E3Q8N5X7 224 aaKnown RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 ST6GALNAC3Q8NDV1 305 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR51A2Q8NGJ7 313 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 MCFD2Q8NI22 146 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 S100ZQ8WXG8 99 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 KCNS1Q96KK3 526 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 NRTNQ99748 197 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 MRPL20Q9BYC9 149 aaKnown RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF436Q9C0F3 470 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 OR8D2Q9GZM6 311 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 DUSP21Q9H596 190 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 FAM60AQ9NP50 221 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 TVP23BQ9NYZ1 205 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 RSL24D1Q9UHA3 163 aaKnown RBP3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 ZNF580Q9UK33 172 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 INSIG2Q9Y5U4 225 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 TMEM14AQ9Y6G1 99 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 NOTCH2Q04721 2471 aa3.16□□□□□ -1.9
HMGB1P21-201ENST00000502313 CELSR2Q9HCU4 2923 aa3.15□□□□□ -1.9
HMGB1P21-201ENST00000502313 WI2-2373I1.2A0A1W2PRP0 233 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF850A8MQ14 1090 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 NDUFC2-KCTD14E9PQ53 114 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 H3BSA7 217 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 BHLHE40O14503 412 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 SLC22A1O15245 554 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 PDE6DO43924 150 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 AMBPP02760 352 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 PFN1P07737 140 aaKnown RBP3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 PRTN3P24158 256 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 TDGF1P3P51864 188 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 CTBP2P56545 445 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 TCTAP57738 103 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 DEFA1P59665 94 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 PPP1CAP62136 330 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 GRB2P62993 217 aaKnown RBP3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 BTG2P78543 158 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 CDK5Q00535 292 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 IFITM3Q01628 133 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 MEF2CQ06413 473 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 JOSD1Q15040 202 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 KRTAP27-1Q3LI81 207 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF404Q494X3 552 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 ORMDL2Q53FV1 153 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 CASC10Q5T4H9 136 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 NXNL2Q5VZ03 156 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 TEX36Q5VZQ5 186 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 LPCAT3Q6P1A2 487 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 TBPL2Q6SJ96 375 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 SMARCD3Q6STE5 483 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMPPEQ6ZT21 453 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM179BQ7Z7N9 219 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF584Q8IVC4 421 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 DRAM1Q8N682 238 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR4K5Q8NGD3 323 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR5D16Q8NGK9 328 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR5W2Q8NH69 310 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 C7orf33Q8WU49 177 aa3.15□□□□□ -1.91
HMGB1P21-201ENST00000502313 ACY3Q96HD9 319 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms