RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TRAV14DV4A0A0A6YYC5 116 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 TEX50A0A1B0GTY4 177 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 FGF2P09038 288 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 TRAPPC2P0DI81 140 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 TRAPPC2BP0DI82 140 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 NQO2P16083 231 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 RAB6AP20340 208 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 RELQ04864 619 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-236ENST00000498808 TMEM41BQ5BJD5 291 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 CNIH2Q6PI25 160 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 HSD17B13Q7Z5P4 300 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-236ENST00000498808 C8orf59Q8N0T1 100 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-236ENST00000498808 CSNK1G2-AS1Q8NCQ2 148 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 ST8SIA2Q92186 375 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 CLEC5AQ9NY25 188 aa11.2□□□□□ -0.62
HDAC6-236ENST00000498808 ERICH4A6NGS2 130 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 DNASE2O00115 360 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-236ENST00000498808 SULT1C2O00338 296 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 HPRT1P00492 218 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 APOHP02749 345 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-236ENST00000498808 RANBP1P43487 201 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 OR10A3P58181 314 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 C1orf134Q5TEV5 83 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 UBE2DNLQ8IWF7 75 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 C10orf67Q8IYJ2 551 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 VSIRQ9H7M9 311 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 NDUFA4L2Q9NRX3 87 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 TBC1D24Q9ULP9 559 aa11.19□□□□□ -0.62
HDAC6-236ENST00000498808 TRAV2A0A0B4J234 112 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 ST8SIA3O43173 380 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 SPP1P10451 314 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 FABP5Q01469 135 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 TNP2Q05952 138 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 CDNFQ49AH0 187 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 MORN3Q6PF18 240 aaPredicted RBP11.18□□□□□ -0.62
HDAC6-236ENST00000498808 OR1L8Q8NGR8 309 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 NUDCD2Q8WVJ2 157 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 SECTM1Q8WVN6 248 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 LSM10Q969L4 123 aaKnown RBP11.18□□□□□ -0.62
HDAC6-236ENST00000498808 NXF2Q9GZY0 626 aaKnown RBP11.18□□□□□ -0.62
HDAC6-236ENST00000498808 DCSTAMPQ9H295 470 aa11.18□□□□□ -0.62
HDAC6-236ENST00000498808 IGHV3-66A0A0C4DH42 116 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 METTL21EPA6NDL7 271 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 KNCNA6PVL3 124 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 IFNA21P01568 189 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 IFNA17P01571 189 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 CD5P06127 495 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 MSMO1Q15800 293 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 HACD4Q5VWC8 232 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 DMBX1Q8NFW5 382 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 HINT2Q9BX68 163 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 SCRT2Q9NQ03 307 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 TMEM14BQ9NUH8 114 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 ANXA10Q9UJ72 324 aa11.17□□□□□ -0.62
HDAC6-236ENST00000498808 IFITM5A6NNB3 132 aa11.16□□□□□ -0.62
HDAC6-236ENST00000498808 ARL6IP1Q15041 203 aa11.16□□□□□ -0.62
HDAC6-236ENST00000498808 TRAM1Q15629 374 aa11.16□□□□□ -0.62
HDAC6-236ENST00000498808 OR13F1Q8NGS4 319 aa11.16□□□□□ -0.62
HDAC6-236ENST00000498808 ATG5Q9H1Y0 275 aa11.16□□□□□ -0.62
HDAC6-236ENST00000498808 PLEKHA2Q9HB19 425 aa11.16□□□□□ -0.62
HDAC6-236ENST00000498808 RABAC1Q9UI14 185 aa11.16□□□□□ -0.62
HDAC6-236ENST00000498808 TMEM235A6NFC5 223 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 PTGES3LE9PB15 166 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 I3L2K1 104 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 SSX5O60225 188 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 EIF4EP06730 217 aaKnown RBP11.15□□□□□ -0.62
HDAC6-236ENST00000498808 HSMCR30P0CW71 290 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 PTHLHP12272 177 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 PSMA1P25786 263 aaKnown RBP11.15□□□□□ -0.62
HDAC6-236ENST00000498808 RPL11P62913 178 aaKnown RBP11.15□□□□□ -0.62
HDAC6-236ENST00000498808 CATR1Q13166 79 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 UBE2UQ5VVX9 321 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 TOMM20LQ6UXN7 152 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 ZBTB34Q8NCN2 500 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 DUSP18Q8NEJ0 188 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 SLC25A46Q96AG3 418 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 GINS3Q9BRX5 216 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 NSG2Q9Y328 171 aa11.15□□□□□ -0.62
HDAC6-236ENST00000498808 K7EQG2 157 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 IGHV3-48P01763 117 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 NPY1RP25929 384 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 FCGR2CP31995 323 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 MFAP4P55083 255 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 PACRGLQ8N7B6 248 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 OR1P1Q8NH06 330 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 OR51H1Q8NH63 302 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 COMMD9Q9P000 198 aa11.14□□□□□ -0.63
HDAC6-236ENST00000498808 DMBT1Q9UGM3 2413 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-236ENST00000498808 MARCH11A6NNE9 402 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 PPYP01298 95 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 ZNF688P0C7X2 276 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 RNF212Q495C1 297 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 MISP3Q96FF7 219 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 GRAMD2BQ96HH9 432 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 TXN2Q99757 166 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 SLC5A7Q9GZV3 580 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 ZFAND3Q9H8U3 227 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 OR51B2Q9Y5P1 312 aa11.13□□□□□ -0.63
HDAC6-236ENST00000498808 DBX1A6NMT0 343 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms