RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 RBMY1A1P0DJD3 496 aaKnown RBP10.12□□□□□ -0.79
CCDC58-207ENST00000498466 RBMY1CP0DJD4 496 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 FCGR2CP31995 323 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 DEFB131AP59861 70 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 RBMY1FQ15415 496 aaKnown RBP10.12□□□□□ -0.79
CCDC58-207ENST00000498466 MSMO1Q15800 293 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 FAM90A2PQ658T7 463 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 TCF24Q7RTU0 167 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 STHQ8IWL8 128 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 ZBTB34Q8NCN2 500 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 OR1L8Q8NGR8 309 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 OR51H1Q8NH63 302 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 LSM10Q969L4 123 aaKnown RBP10.12□□□□□ -0.79
CCDC58-207ENST00000498466 TPRKBQ9Y3C4 175 aa10.12□□□□□ -0.79
CCDC58-207ENST00000498466 DNASE2O00115 360 aaPredicted RBP10.11□□□□□ -0.79
CCDC58-207ENST00000498466 RGS10O43665 173 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 SSX5O60225 188 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 EIF4EP06730 217 aaKnown RBP10.11□□□□□ -0.79
CCDC58-207ENST00000498466 PTHLHP12272 177 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 MIFP14174 115 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 ERVK-16P61578 105 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 RCN1Q15293 331 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 OGFRL1Q5TC84 451 aaPredicted RBP10.11□□□□□ -0.79
CCDC58-207ENST00000498466 ZNF773Q6PK81 442 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 POM121L12Q8N7R1 296 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 GIMAP1Q8WWP7 306 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 OR10C1Q96KK4 312 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 RNF126Q9BV68 326 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 KRTAP4-5Q9BYR2 181 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 SLC5A7Q9GZV3 580 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 PLEKHA2Q9HB19 425 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 NDUFA4L2Q9NRX3 87 aa10.11□□□□□ -0.79
CCDC58-207ENST00000498466 SMIM30A4D0T7 59 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 CASQ2O14958 399 aaPredicted RBP10.1□□□□□ -0.79
CCDC58-207ENST00000498466 DFFBO76075 338 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 PPYP01298 95 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 P0DMU3 169 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 FAM231AP0DMU4 169 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 FAM231CP0DMU5 169 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 FXYD4P59646 89 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 RPL11P62913 178 aaKnown RBP10.1□□□□□ -0.79
CCDC58-207ENST00000498466 AADACL3Q5VUY0 350 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 DGCR14Q96DF8 476 aaKnown RBP10.1□□□□□ -0.79
CCDC58-207ENST00000498466 ZNF414Q96IQ9 312 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 MS4A6AQ9H2W1 248 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 VCXQ9H320 206 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 COMMD9Q9P000 198 aa10.1□□□□□ -0.79
CCDC58-207ENST00000498466 HSPG2P98160 4391 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 ST8SIA3O43173 380 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 CD5P06127 495 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 ZNF818PQ6ZRF7 136 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 BEST4Q8NFU0 473 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 SLC25A46Q96AG3 418 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 DUSP21Q9H596 190 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 NSG2Q9Y328 171 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 OR51B2Q9Y5P1 312 aa10.09□□□□□ -0.79
CCDC58-207ENST00000498466 ELOA3CA0A087WX78 387 aaPredicted RBP10.08□□□□□ -0.8
CCDC58-207ENST00000498466 DEFB131BA0A096LNP1 70 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 MARCH11A6NNE9 402 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 SCGNO76038 276 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 AMBPP02760 352 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 MFAP4P55083 255 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 TMEM41BQ5BJD5 291 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 TMEM17Q86X19 198 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 FAM24BQ8N5W8 94 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 ST8SIA2Q92186 375 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 MISP3Q96FF7 219 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 TMEM56Q96MV1 263 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 GINS3Q9BRX5 216 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 NXF2Q9GZY0 626 aaKnown RBP10.08□□□□□ -0.8
CCDC58-207ENST00000498466 MUC4Q99102 2169 aa10.08□□□□□ -0.8
CCDC58-207ENST00000498466 IGHV3-66A0A0C4DH42 116 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 ZNF705EA8MWA4 302 aaPredicted RBP10.07□□□□□ -0.8
CCDC58-207ENST00000498466 SNAPC5O75971 98 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 APOHP02749 345 aaPredicted RBP10.07□□□□□ -0.8
CCDC58-207ENST00000498466 GIG44P09565 113 aaPredicted RBP10.07□□□□□ -0.8
CCDC58-207ENST00000498466 C22orf42Q6IC83 251 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 MORN3Q6PF18 240 aaPredicted RBP10.07□□□□□ -0.8
CCDC58-207ENST00000498466 ZNF767PQ75MW2 155 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 PRSS48Q7RTY5 328 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 ZNF575Q86XF7 245 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 DUSP18Q8NEJ0 188 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 OR1P1Q8NH06 330 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 TXN2Q99757 166 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 NDUFAF3Q9BU61 184 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 RABAC1Q9UI14 185 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 X6R8D5 127 aa10.07□□□□□ -0.8
CCDC58-207ENST00000498466 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 I3L2K1 104 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 GNG7O60262 68 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 KRASP01116 189 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 IGHV3-48P01763 117 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 FCER2P06734 321 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 SPP1P10451 314 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 C4BPBP20851 252 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 TRPT1Q86TN4 253 aaKnown RBP10.06□□□□□ -0.8
CCDC58-207ENST00000498466 LILRB2Q8N423 598 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
CCDC58-207ENST00000498466 CLEC5AQ9NY25 188 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms