RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 PTBP1P26599 531 aaKnown RBP eCLIP11.82□□□□□ -0.52
MUC1-220ENST00000498431 PRSS3P35030 304 aa11.82□□□□□ -0.52
MUC1-220ENST00000498431 ZNF66Q6ZN08 573 aa11.82□□□□□ -0.52
MUC1-220ENST00000498431 SNX29P2Q8IUI4 249 aa11.82□□□□□ -0.52
MUC1-220ENST00000498431 APRG1Q8IVJ8 170 aa11.82□□□□□ -0.52
MUC1-220ENST00000498431 OR10W1Q8NGF6 305 aa11.82□□□□□ -0.52
MUC1-220ENST00000498431 HRASLSQ9HDD0 168 aa11.82□□□□□ -0.52
MUC1-220ENST00000498431 DAZ1Q9NQZ3 744 aaKnown RBP11.82□□□□□ -0.52
MUC1-220ENST00000498431 FABP12A6NFH5 140 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 ZNF207O43670 478 aaKnown RBP11.81□□□□□ -0.52
MUC1-220ENST00000498431 SSX5O60225 188 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 PTHLHP12272 177 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 CBX5P45973 191 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 GATAD1Q8WUU5 269 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 GALNT14Q96FL9 552 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 CHRDL1Q9BU40 450 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 SCPEP1Q9HB40 452 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 CCL28Q9NRJ3 127 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 DNAH17Q9UFH2 4485 aa11.81□□□□□ -0.52
MUC1-220ENST00000498431 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 SULT1C2O00338 296 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
MUC1-220ENST00000498431 IL18Q14116 193 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 LAMTOR1Q6IAA8 161 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 CCDC190Q86UF4 302 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 SPAG16Q8N0X2 631 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 OR4A5Q8NH83 315 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 CD300LFQ8TDQ1 290 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 SECTM1Q8WVN6 248 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 ABHD1Q96SE0 405 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 SOSTQ9BQB4 213 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 C20orf24Q9BUV8 137 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 ANXA10Q9UJ72 324 aa11.8□□□□□ -0.52
MUC1-220ENST00000498431 OR4C46A6NHA9 309 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 UPK2O00526 184 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 ADMP35318 185 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 MFAP2P55001 183 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 MRPS10P82664 201 aaKnown RBP11.79□□□□□ -0.52
MUC1-220ENST00000498431 SPANXN2Q5MJ10 180 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 LINC00299Q6ZSB3 139 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 VN1R17PQ8TDU5 208 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 GPX8Q8TED1 209 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 ZNF414Q96IQ9 312 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 RARRES2Q99969 163 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 IFT46Q9NQC8 304 aa11.79□□□□□ -0.52
MUC1-220ENST00000498431 F8W735 103 aaPredicted RBP11.78□□□□□ -0.52
MUC1-220ENST00000498431 CTDSPLO15194 276 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 ETV6P41212 452 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 WT1-ASQ06250 92 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 HOGA1Q86XE5 327 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 GDPD1Q8N9F7 314 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 C11orf45Q8TAV5 145 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 FCAMRQ8WWV6 532 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 BSCL2Q96G97 398 aaPredicted RBP11.78□□□□□ -0.52
MUC1-220ENST00000498431 QTRT1Q9BXR0 403 aaKnown RBP11.78□□□□□ -0.52
MUC1-220ENST00000498431 COMMD5Q9GZQ3 224 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 THYN1Q9P016 225 aa11.78□□□□□ -0.52
MUC1-220ENST00000498431 DYNC1H1Q14204 4646 aaKnown RBP11.77□□□□□ -0.52
MUC1-220ENST00000498431 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 NDUFA4O00483 81 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 DEFB4AO15263 64 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 OR13C7P0DN81 318 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 FCGR2CP31995 323 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 TAS2R31P59538 309 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 RBMS2Q15434 407 aaKnown RBP11.77□□□□□ -0.53
MUC1-220ENST00000498431 POU2AF1Q16633 256 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 SLC25A24Q6NUK1 477 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 BEST4Q8NFU0 473 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 RNF2Q99496 336 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 C11orf68Q9H3H3 251 aaKnown RBP11.77□□□□□ -0.53
MUC1-220ENST00000498431 TMEM140Q9NV12 185 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 V9GYH0 126 aa11.77□□□□□ -0.53
MUC1-220ENST00000498431 MPTX1A8MV57 137 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 GABARAPH6UMI1 98 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 RBFOX2O43251 390 aaKnown RBP eCLIP11.76□□□□□ -0.53
MUC1-220ENST00000498431 SERPINE2P07093 398 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 NQO2P16083 231 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 TFPI2P48307 235 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 PYDC2Q56P42 97 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 RNASE12Q5GAN4 147 aaKnown RBP11.76□□□□□ -0.53
MUC1-220ENST00000498431 GVQW1Q8N7I0 195 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 OR52I2Q8NH67 350 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 SRSF8Q9BRL6 282 aaKnown RBP11.76□□□□□ -0.53
MUC1-220ENST00000498431 AIFM2Q9BRQ8 373 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 ANAPC10Q9UM13 185 aa11.76□□□□□ -0.53
MUC1-220ENST00000498431 IGKV3-7A0A075B6H7 116 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 TEX50A0A1B0GTY4 177 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 K7EMT4 169 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 GSTZ1O43708 216 aaPredicted RBP11.75□□□□□ -0.53
MUC1-220ENST00000498431 HPRT1P00492 218 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 PPYP01298 95 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 IFNA4P05014 189 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 FCER2P06734 321 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 TRAPPC2P0DI81 140 aa11.75□□□□□ -0.53
MUC1-220ENST00000498431 TRAPPC2BP0DI82 140 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms