RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PTTG1O95997 202 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 FGF2P09038 288 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 MYOD1P15172 320 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 RHOGP84095 191 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 DEFA5Q01523 94 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 IZUMO4Q1ZYL8 232 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 ANKRD55Q3KP44 614 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 FAM219AQ8IW50 185 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 CADM3Q8N126 398 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 TTC9CQ8N5M4 171 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 OR52B4Q8NGK2 314 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 COQ8AQ8NI60 647 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 FYTTD1Q96QD9 318 aaKnown RBP11.78□□□□□ -0.52
NUP50-219ENST00000497960 PEF1Q9UBV8 284 aaKnown RBP11.78□□□□□ -0.52
NUP50-219ENST00000497960 OR51B2Q9Y5P1 312 aa11.78□□□□□ -0.52
NUP50-219ENST00000497960 A0A0B4J2A0 478 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 A0A0G2JRQ6 117 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 DUXBA0A1W2PPF3 345 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 FAM223BA6NKX1 122 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 IL6RP08887 468 aaPredicted RBP11.77□□□□□ -0.53
NUP50-219ENST00000497960 P0C879 139 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 ATP5G2Q06055 141 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 TATDN3Q17R31 274 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 FAM223AQ8IWN6 122 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 DUSP18Q8NEJ0 188 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 SEC22CQ9BRL7 303 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 PDCD10Q9BUL8 212 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 HINT2Q9BX68 163 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 FKBP11Q9NYL4 201 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 SHPKQ9UHJ6 478 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
NUP50-219ENST00000497960 LSM4Q9Y4Z0 139 aaKnown RBP11.77□□□□□ -0.53
NUP50-219ENST00000497960 HMX3A6NHT5 357 aa11.76□□□□□ -0.53
NUP50-219ENST00000497960 PRH1P02810 166 aa11.76□□□□□ -0.53
NUP50-219ENST00000497960 THOC7Q6I9Y2 204 aaKnown RBP11.76□□□□□ -0.53
NUP50-219ENST00000497960 LYZL2Q7Z4W2 148 aa11.76□□□□□ -0.53
NUP50-219ENST00000497960 LRTM2Q8N967 370 aa11.76□□□□□ -0.53
NUP50-219ENST00000497960 NECAP1Q8NC96 275 aa11.76□□□□□ -0.53
NUP50-219ENST00000497960 OR1L8Q8NGR8 309 aa11.76□□□□□ -0.53
NUP50-219ENST00000497960 LSM10Q969L4 123 aaKnown RBP11.76□□□□□ -0.53
NUP50-219ENST00000497960 QTRT1Q9BXR0 403 aaKnown RBP11.76□□□□□ -0.53
NUP50-219ENST00000497960 TMEM14BQ9NUH8 114 aa11.76□□□□□ -0.53
NUP50-219ENST00000497960 CACNG5Q9UF02 275 aa11.76□□□□□ -0.53
NUP50-219ENST00000497960 TRBV9A0A0B4J1U6 114 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 NPIPB5A8MRT5 1133 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 TEX22C9J3V5 150 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 INMT-MINDY4F8WBC2 141 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 DHFRP00374 187 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 SPNP16150 400 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 MECP2P51608 486 aaKnown RBP11.75□□□□□ -0.53
NUP50-219ENST00000497960 EXOSC2Q13868 293 aaKnown RBP11.75□□□□□ -0.53
NUP50-219ENST00000497960 KLF5Q13887 457 aaPredicted RBP11.75□□□□□ -0.53
NUP50-219ENST00000497960 RPEL1Q2QD12 228 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 FAM209BQ5JX69 171 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 OR5B3Q8NH48 314 aa11.75□□□□□ -0.53
NUP50-219ENST00000497960 ZNF431Q8TF32 576 aaPredicted RBP11.75□□□□□ -0.53
NUP50-219ENST00000497960 GPN1Q9HCN4 374 aaPredicted RBP11.75□□□□□ -0.53
NUP50-219ENST00000497960 TEX50A0A1B0GTY4 177 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 PRAF2O60831 178 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 OR2J3O76001 311 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 TRBV12-3P01733 135 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 HOXB5P09067 269 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 TRAPPC2P0DI81 140 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 TRAPPC2BP0DI82 140 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 SULT1A3P0DMM9 295 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 SULT1A4P0DMN0 295 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 SYNJ2BPP57105 145 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 RGS21Q2M5E4 152 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 NMSQ5H8A3 153 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 OR9G4Q8NGQ1 327 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 GPR146Q96CH1 333 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 SMAD5-AS1Q9Y6J3 95 aa11.74□□□□□ -0.53
NUP50-219ENST00000497960 A0A0B4J293 547 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 A0A1B0GW64 132 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 E7EUB6 86 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 ST8SIA3O43173 380 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 NXPH3O95157 252 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 IFNA17P01571 189 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 IL5P05113 134 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 GP9P14770 177 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 PSMB6P28072 239 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 HOXA1P49639 335 aaPredicted RBP11.73□□□□□ -0.53
NUP50-219ENST00000497960 SMCO1Q147U7 214 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 C15orf32Q32M92 178 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 SPINK9Q5DT21 86 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 MITD1Q8WV92 249 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 PLEKHA3Q9HB20 300 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 FBXL7Q9UJT9 491 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 TMED3Q9Y3Q3 217 aa11.73□□□□□ -0.53
NUP50-219ENST00000497960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.72□□□□□ -0.53
NUP50-219ENST00000497960 CGB1A6NKQ9 187 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 ADAP1O75689 374 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 IFNA21P01568 189 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 REG1AP05451 166 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 CRYGCP07315 174 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
NUP50-219ENST00000497960 DEFA4P12838 97 aa11.72□□□□□ -0.53
NUP50-219ENST00000497960 AREGP15514 252 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms