RNA–Protein interactions for RNA: ENST00000497700.1

ELL3-208, Transcript of elongation factor for RNA polymerase II 3, human

TSL 3

Gene ELL3, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELL3-208	ENST00000497700	BOLA1	Q9Y3E2	137 aa		13.94	□□□□□ -0.18
ELL3-208	ENST00000497700	FXYD6-FXYD2	A0A087WZ82	144 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	SRRM4	A7MD48	611 aa	Known RBP	13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	SCGB1D2	O95969	90 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	IL6R	P08887	468 aa	Predicted RBP	13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	PET100	P0DJ07	73 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	CD1B	P29016	333 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	CDX1	P47902	265 aa	Predicted RBP	13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	S100A10	P60903	97 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	SSX9	Q7RTT3	188 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	VKORC1L1	Q8N0U8	176 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	RNF152	Q8N8N0	203 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	HARBI1	Q96MB7	349 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	TMEM140	Q9NV12	185 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	MBD2	Q9UBB5	411 aa		13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	ZMAT5	Q9UDW3	170 aa	Known RBP	13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	LSM5	Q9Y4Y9	91 aa	Known RBP	13.93	□□□□□ -0.18
ELL3-208	ENST00000497700	RYR2	Q92736	4967 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	DEDD	O75618	318 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	MOS	P00540	346 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	RLN2	P04090	185 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	ELANE	P08246	267 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	OR9G9	P0C7N8	305 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	LGALS7	P47929	136 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	RPS16	P62249	146 aa	Known RBP	13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	ASPHD1	Q5U4P2	390 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	OR4A47	Q6IF82	309 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	ZNF546	Q86UE3	836 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	OR5B12	Q96R08	314 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	RASL11B	Q9BPW5	248 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	GNB4	Q9HAV0	340 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	GAR1	Q9NY12	217 aa	Known RBP	13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	OR5AC2	Q9NZP5	309 aa		13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	DYNC2H1	Q8NCM8	4307 aa	Known RBP	13.92	□□□□□ -0.18
ELL3-208	ENST00000497700	SORL1	Q92673	2214 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	FAM90A26	D6RGX4	464 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	LY86	O95711	162 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	FHL3	Q13643	280 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	AARD	Q4LEZ3	155 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	PUSL1	Q8N0Z8	303 aa	Known RBP	13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	OR11H1	Q8NG94	326 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	C4orf3	Q8WVX3	66 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	RNF5	Q99942	180 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	KLK15	Q9H2R5	256 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	BET1L	Q9NYM9	111 aa		13.91	□□□□□ -0.18
ELL3-208	ENST00000497700	UPK2	O00526	184 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	IGLV2-23	P01705	113 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	IGHG4	P01861	327 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	SAA1	P0DJI8	122 aa	Predicted RBP	13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	PSMB8	P28062	276 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	POLR2G	P62487	172 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	OR4A16	Q8NH70	328 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	DCUN1D4	Q92564	292 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	RITA1	Q96K30	269 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	C11orf1	Q9H5F2	150 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	HSPB7	Q9UBY9	170 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	TNFSF18	Q9UNG2	199 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	RCL1	Q9Y2P8	373 aa	Known RBP	13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	NSG2	Q9Y328	171 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	WSB1	Q9Y6I7	421 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	TENM2	Q9NT68	2774 aa		13.9	□□□□□ -0.18
ELL3-208	ENST00000497700	TRAV3	A0A0B4J244	114 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700		E5RGE8	158 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700		G3V318	75 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	WRB	O00258	174 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	ARPC5	O15511	151 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	NXPH3	O95157	252 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	CXCL2	P19875	107 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	UBE2K	P61086	200 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	GNB1	P62873	340 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	VMA21	Q3ZAQ7	101 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	OR4A5	Q8NH83	315 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	VSTM2A	Q8TAG5	236 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	TSNAX	Q99598	290 aa	Known RBP	13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	QTRT1	Q9BXR0	403 aa	Known RBP	13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	MAGT1	Q9H0U3	335 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	CACFD1	Q9UGQ2	172 aa		13.89	□□□□□ -0.19
ELL3-208	ENST00000497700	C3orf84	H3BNL1	204 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	MED6	O75586	246 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	S100A1	P23297	94 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	CNTFR	P26992	372 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	OR2B8P	P59922	312 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	TNFRSF9	Q07011	255 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	KIAA0141	Q14154	515 aa	Predicted RBP	13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	ZNF429	Q86V71	674 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	SBSPON	Q8IVN8	264 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	TEX45	Q8NA69	505 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	OR52E5	Q8NH55	327 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	TMEM167A	Q8TBQ9	72 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	MFF	Q9GZY8	342 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	PRND	Q9UKY0	176 aa		13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	FOXA2	Q9Y261	457 aa	Predicted RBP	13.88	□□□□□ -0.19
ELL3-208	ENST00000497700	DNAH7	Q8WXX0	4024 aa		13.87	□□□□□ -0.19
ELL3-208	ENST00000497700	SACS	Q9NZJ4	4579 aa		13.87	□□□□□ -0.19
ELL3-208	ENST00000497700	C15orf61	A6NNL5	157 aa		13.87	□□□□□ -0.19
ELL3-208	ENST00000497700	SYNGR2	O43760	224 aa		13.87	□□□□□ -0.19
ELL3-208	ENST00000497700	SSSCA1	O60232	199 aa		13.87	□□□□□ -0.19
ELL3-208	ENST00000497700	RBMXL2	O75526	392 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms